ggKbase home page

scnpilot_expt_750_p_scaffold_4114_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_4114_curated_1
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1039)
DNA (1038bp) protein (346aa)
Cation/multidrug efflux pump n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CK31_ELIME
Cation/multidrug efflux pump {ECO:0000313|EMBL:EOR29692.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
Cation/multidrug efflux pump; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
scnpilot_expt_750_p_scaffold_4114_curated_2
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1065..2261)
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CK78_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EOR29693.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_4114_curated_3
unknown

Not on your lists

comp(2273..2425)
DNA (153bp) protein (51aa)

This feature has no annotations

scnpilot_expt_750_p_scaffold_4114_curated_4
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2900..3988
DNA (1089bp) protein (363aa)
Phosphate ABC transporter substrate-binding protein, PhoT family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4W5_PALPW
phosphate ABC transporter substrate-binding protein, phot family; K02040 phosphate transport system substrate-binding protein
Phosphate ABC transporter substrate-binding protein, PhoT family {ECO:0000313|EMBL:ADQ79759.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_expt_750_p_scaffold_4114_curated_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4067..4963
DNA (897bp) protein (299aa)
Phosphate ABC transporter membrane protein 1, PhoT family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0T1_PALPW
phosphate ABC transporter membrane protein 1, phot family; K02037 phosphate transport system permease protein
Phosphate ABC transporter membrane protein 1, PhoT family {ECO:0000313|EMBL:ADQ78206.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
scnpilot_expt_750_p_scaffold_4114_curated_6
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5091..5933
DNA (843bp) protein (281aa)
Phosphate ABC transporter permease PstA n=1 Tax=Tannerella sp. CAG:51 RepID=R7DFF1_9PORP
Phosphate ABC transporter permease PstA {ECO:0000313|EMBL:CDD89249.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
phosphate ABC transporter, inner membrane subunit psta; K02038 phosphate transport system permease protein
scnpilot_expt_750_p_scaffold_4114_curated_7
Candidatus Azobacteroides pseudotrichonymphae, Candidatus Azobacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6122..7078
DNA (957bp) protein (319aa)
hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
Hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase n=1 Tax=Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YQR9_AZOPC
Hydroxymethylbilane synthase/uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase {ECO:0000313|EMBL:BAG83541.1}; TaxID=511995 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Candidatus Azobacteroides.;" source="Azobacteroides pseudotrichonymphae genomovar. CFP2.;"
Displaying 7 items

View Taxonomy