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scnpilot_expt_750_p_scaffold_5440_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_5440_curated_1
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(226..1029)
DNA (804bp) protein (268aa)
Putative xylanase/chitin deacetylase n=1 Tax=Flavobacterium sp. CF136 RepID=J2J333_9FLAO
Chitooligosaccharide deacetylase {ECO:0000313|EMBL:KGO95156.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
polysaccharide deacetylase
scnpilot_expt_750_p_scaffold_5440_curated_2
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1139..1939)
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000363954E
Uncharacterized protein {ECO:0000313|EMBL:AHJ97899.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
TonB family protein
scnpilot_expt_750_p_scaffold_5440_curated_3
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2332..3336
DNA (1005bp) protein (335aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
tRNA-dihydrouridine synthase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J3J2_9PORP
TIM-barrel enzyme
scnpilot_expt_750_p_scaffold_5440_curated_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3424..4152
DNA (729bp) protein (243aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7X4S8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS59077.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_5440_curated_5
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4348..4833
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5P770_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ10074.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_5440_curated_6
Prevotella sp. oral taxon 473, Alloprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5238..5465
DNA (228bp) protein (76aa)
50S ribosomal protein L13 n=1 Tax=Prevotella sp. oral taxon 473 str. F0040 RepID=L1MAU5_9BACT
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1035197 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella.;" source="Prevotella sp. oral taxon 473 str. F0040.;"
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
Displaying 6 items

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