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scnpilot_expt_750_p_scaffold_5507_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_5507_curated_1
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15..533)
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J047_9PORP
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5
scnpilot_expt_750_p_scaffold_5507_curated_2
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(539..883)
DNA (345bp) protein (115aa)
50S ribosomal protein L18 n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WVU0_9PORP
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
scnpilot_expt_750_p_scaffold_5507_curated_3
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(903..1457)
DNA (555bp) protein (185aa)
50S ribosomal protein L6 n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J049_9PORP
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
rplF; 50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
scnpilot_expt_750_p_scaffold_5507_curated_4
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1477..1872)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=3 Tax=Parabacteroides RepID=K6ACE3_9PORP
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
scnpilot_expt_750_p_scaffold_5507_curated_5
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2018..2272)
DNA (255bp) protein (85aa)
30S ribosomal protein S14 n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WVT7_9PORP
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-239 OH1446.;"
rpsN; 30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
scnpilot_expt_750_p_scaffold_5507_curated_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2297..2854)
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J052_9PORP
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
scnpilot_expt_750_p_scaffold_5507_curated_7
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(2854..3171)
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WVT5_9PORP
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
scnpilot_expt_750_p_scaffold_5507_curated_8
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3192..3557)
DNA (366bp) protein (122aa)
50S ribosomal protein L14 n=1 Tax=Tannerella sp. CAG:118 RepID=R5IDK5_9PORP
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
scnpilot_expt_750_p_scaffold_5507_curated_9
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3559..3816)
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=2 Tax=Dysgonomonas RepID=F5J055_9PORP
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
scnpilot_expt_750_p_scaffold_5507_curated_10
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(3828..4022)
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WVT2_9PORP
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
rpmC; 50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
scnpilot_expt_750_p_scaffold_5507_curated_11
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4032..4460)
DNA (429bp) protein (143aa)
50S ribosomal protein L16 n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J057_9PORP
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
scnpilot_expt_750_p_scaffold_5507_curated_12
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(4489..5232)
DNA (744bp) protein (248aa)
30S ribosomal protein S3 n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WVT0_9PORP
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
Displaying 12 items

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