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scnpilot_expt_750_p_scaffold_6120_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_expt_750_p_scaffold_6120_curated_1
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1..522)
DNA (522bp) protein (174aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:EGJ71122.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EGJ71122.1};; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
DNA-directed DNA polymerase n=1 Tax=Bacteroides coprosuis DSM 18011 RepID=F3ZU21_9BACE
SOS mutagenesis and repair protein UmuC-like protein; K03502 DNA polymerase V
scnpilot_expt_750_p_scaffold_6120_curated_2
BJP_IG2069_Methanobacteriales_33_27, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(524..889)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002EFA682
hypothetical protein
Tax=BJP_IG2069_Methanobacteriales_33_27
scnpilot_expt_750_p_scaffold_6120_curated_3
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(886..1326)
DNA (441bp) protein (147aa)
putative UmuD/RumA DNA repair protein; K03503 DNA polymerase V [EC:3.4.21.-]
Peptidase S24/S26A/S26B, conserved region n=2 Tax=Bacteroides coprosuis RepID=F3ZU23_9BACE
Putative UV repair protein {ECO:0000313|EMBL:CAD55716.1}; TaxID=151276 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis.;"
scnpilot_expt_750_p_scaffold_6120_curated_4
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(1382..2230)
DNA (849bp) protein (283aa)
NmrA family protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QX67_CHLT3
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:ACF14877.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
scnpilot_expt_750_p_scaffold_6120_curated_5
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(2293..2865)
DNA (573bp) protein (191aa)
Cyclic nucleotide-binding protein n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QX66_CHLT3
cyclic nucleotide-binding protein
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:ACF14876.1}; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
scnpilot_expt_750_p_scaffold_6120_curated_6
Bacteroides coprosuis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3214..4833
DNA (1620bp) protein (540aa)
Small GTP-binding protein n=2 Tax=Bacteroides coprosuis RepID=F3ZU25_9BACE
Small GTP-binding protein {ECO:0000313|EMBL:EGJ71126.1}; TaxID=679937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprosuis DSM 18011.;"
tetracycline resistance protein rbh
scnpilot_expt_750_p_scaffold_6120_curated_7
Bacteroides helcogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4914..5273
DNA (360bp) protein (120aa)
Transcriptional regulator, HxlR family n=1 Tax=Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P 36-108) RepID=E6SQ07_BACT6
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ADV42912.1}; TaxID=693979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides helcogenes (strain ATCC 35417 / DSM 20613 / JCM 6297 / P; 36-108).;"
scnpilot_expt_750_p_scaffold_6120_curated_8
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5356..5568
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVD3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02583.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_6120_curated_9
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5708..6070)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9I769_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAE86660.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_6120_curated_10
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6067..6444)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X423_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05069.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_6120_curated_11
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6459..6938)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J468_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99483.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
scnpilot_expt_750_p_scaffold_6120_curated_12
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6959..7552)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Alistipes senegalensis RepID=UPI00030A447C
Uncharacterized protein {ECO:0000313|EMBL:GAE86137.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
hypothetical protein
Displaying 12 items

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