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scnpilot_expt_750_p_scaffold_1370_curated_8

Organism: scnpilot_dereplicated_Bacteroidales_2

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 MC: 3 ASCG 13 / 38 MC: 3
Location: comp(5718..6434)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 233.0
  • Bit_score: 342
  • Evalue 4.60e-91
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 235.0
  • Bit_score: 332
  • Evalue 8.10e-89
tRNA pseudouridine synthase B n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CU97_BACPM similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 233.0
  • Bit_score: 342
  • Evalue 3.30e-91

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Taxonomy

Bacteroides plebeius → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 717
ATGAATTTTATAGAAGGCGAAATTTTATATTTTGACAAACCGCTTGACTGGACATCGTTTGCGCTGGTAAAAAAAATACGCAACGGACTGACCCGCAAGTTGAACGTAAAAAAACTGAAAGTGGGACACGCTGGCACGCTCGACCCATTGGCCACCGGAGTGATGATAATATGCACGGGGAAAAAGACCAAACTCATCGAGTCGTTCCAATATCAGGACAAAGAATACGTTGCCGCAATCAGGCTTGGAGCCACCACCCCGTCGTTCGACCTGGAAACTGAAATAGATCAGACCTTCGAAACGTCTCATATAACCAAAGAGTTGGTGGAAGAGACCTTGAAGAAATTTGTGGGAGCCATCGAGCAAATTCCTCCCAGTTTTTCGGCCTGCAAGGTAAATGGCAAACGTGCTTACGACTTGGCCCGCGAGGGAAAGGAAGTGGAGCTGCAATCGAAACTCTTAGTGATTGACGAAATCGAACTTCTTGCGTTTGACCCGCAGGAAATATCCATCCGTGTGGTTTGCAGCAAAGGTACCTACATTCGGGCATTGGCCCGCGACATAGGTCAGGCATTGAACTCGGGAGGTCATTTGGTTGCTTTGCAGCGGACACGAATCGGGGAGATCCGTGTAGAAGATTGCATGAAAACAGATGAACTCGACTCTTTTTTCGAAAAAATAGACCCAACGGTTTTGGAAACCGTAGAAACACATTAA
PROTEIN sequence
Length: 239
MNFIEGEILYFDKPLDWTSFALVKKIRNGLTRKLNVKKLKVGHAGTLDPLATGVMIICTGKKTKLIESFQYQDKEYVAAIRLGATTPSFDLETEIDQTFETSHITKELVEETLKKFVGAIEQIPPSFSACKVNGKRAYDLAREGKEVELQSKLLVIDEIELLAFDPQEISIRVVCSKGTYIRALARDIGQALNSGGHLVALQRTRIGEIRVEDCMKTDELDSFFEKIDPTVLETVETH*