ggKbase home page

SCNpilot_bf_inoc_scaffold_109_curated

Search features with annotation key words

Displaying items 1-30 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_109_curated_1
Prevotella sp. CAG:5226, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1104..1805
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003653D2D
Sel1 protein {ECO:0000313|EMBL:CDA46012.1}; TaxID=1262930 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:5226.;"
SCNpilot_bf_inoc_scaffold_109_curated_2
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1821..2972
DNA (1152bp) protein (384aa)
Trypsin-like serine protease with C-terminal PDZ domain n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NB73_9BACT
Trypsin-like serine protease with C-terminal PDZ domain {ECO:0000313|EMBL:CCZ01375.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
trypsin-like serine protease with C-terminal PDZ domain
SCNpilot_bf_inoc_scaffold_109_curated_3
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

comp(2999..4165)
DNA (1167bp) protein (389aa)
Protein 2 in picA locus n=1 Tax=Bacteroidales bacterium CF RepID=U5Q3M4_9BACT
acyltransferase
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_4
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4187..4489)
DNA (303bp) protein (101aa)
Stage II sporulation protein id=2149236 bin=GWE2_Bacteroidetes_42_39 species=Methylococcus capsulatus genus=Methylococcus taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_109_curated_5
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4512..6860)
DNA (2349bp) protein (783aa)
Stage II sporulation protein E id=4427957 bin=GWA2_Bacteroidetes_42_15 species=Desulfovibrio aespoeensis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Stage II sporulation protein E; K07315 sigma-B regulation protein RsbU (phosphoserine phosphatase)
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_109_curated_6
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6882..7793)
DNA (912bp) protein (304aa)
ABC transporter substrate-binding protein id=4427958 bin=GWA2_Bacteroidetes_42_15 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
ABC transporter substrate-binding protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_109_curated_7
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7817..8752)
DNA (936bp) protein (312aa)
hypothetical protein id=4792133 bin=GWA2_Bacteroidetes_42_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_109_curated_8
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8771..11719)
DNA (2949bp) protein (983aa)
WD40 Domain Protein Beta Propeller n=1 Tax=Bacteroidales bacterium CF RepID=U5QA83_9BACT
hypothetical protein
WD40 Domain Protein Beta Propeller {ECO:0000313|EMBL:AGY54330.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
SCNpilot_bf_inoc_scaffold_109_curated_9
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11729..12718)
DNA (990bp) protein (330aa)
Putative uncharacterized protein id=4792157 bin=GWA2_Bacteroidetes_42_15 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_bf_inoc_scaffold_109_curated_10
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12849..14486
DNA (1638bp) protein (546aa)
Protein containing ABC transporter-like domain protein id=2098239 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
glycosyl transferase family 2
Tax=GWE2_Bacteroidetes_39_28_curated
SCNpilot_bf_inoc_scaffold_109_curated_11

Not on your lists

14495..15721
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z312_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD32194.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
flavoprotein family protein; K07007
SCNpilot_bf_inoc_scaffold_109_curated_12
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

15798..17015
DNA (1218bp) protein (406aa)
Phospholipase/Carboxylesterase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CEX7_KOSOT
phospholipase/Carboxylesterase
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_13
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

16966..17550
DNA (585bp) protein (195aa)
Phospholipase/Carboxylesterase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CEX7_KOSOT
phospholipase/Carboxylesterase
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_14
BJP_IG2102_Bacteroidetes_40_12, Bacteroidetes, Bacteria

Not on your lists

comp(17567..17737)
DNA (171bp) protein (57aa)
Putative uncharacterized protein id=1948270 bin=GWE2_Bacteroidetes_40_15 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_IG2102_Bacteroidetes_40_12
SCNpilot_bf_inoc_scaffold_109_curated_15
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(17750..18604)
DNA (855bp) protein (285aa)
Spfh domain/band 7 family protein id=4486030 bin=GWF2_Bacteroidetes_41_61 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_109_curated_16
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

18877..19884
DNA (1008bp) protein (336aa)
aspartate-ammonia ligase (EC:6.3.1.1); K01914 aspartate--ammonia ligase [EC:6.3.1.1]
Aspartate--ammonia ligase id=4434155 bin=GWF2_Bacteroidetes_41_61 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_bf_inoc_scaffold_109_curated_17
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20073..20741
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI00036ECE44
Magnesium transporter MgtC {ECO:0000313|EMBL:KGO87401.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
MgtC/SapB transporter; K07507 putative Mg2+ transporter-C (MgtC) family protein
SCNpilot_bf_inoc_scaffold_109_curated_18
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

20789..21892
DNA (1104bp) protein (368aa)
Peptidase S9 prolyl oligopeptidase id=4133007 bin=GWF2_Bacteroidetes_39_10 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_19
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

21916..23328
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YFT3_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_20
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

23345..24433
DNA (1089bp) protein (363aa)
AraC family transcriptional regulator id=4525148 bin=GWF2_Bacteroidetes_40_14 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
AraC family transcriptional regulator
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_21
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

24430..25833
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y1E2_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_22
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

25835..28114
DNA (2280bp) protein (760aa)
Exporter of the RND superfamily protein id=4525143 bin=GWF2_Bacteroidetes_40_14 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
exporter of the RND superfamily protein; K07003
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_23
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

28098..28877
DNA (780bp) protein (260aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1XLE2_9BACT
PF07044 domain protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_24
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

28884..29285
DNA (402bp) protein (134aa)
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_25

Not on your lists

29291..30772
DNA (1482bp) protein (494aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
nicotinate phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
Nicotinate phosphoribosyltransferase n=1 Tax=uncultured bacterium RepID=K1Y4R8_9BACT
SCNpilot_bf_inoc_scaffold_109_curated_26
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

30759..31358
DNA (600bp) protein (200aa)
Amidases related to nicotinamidase (EC:3.5.1.-)
Amidases related to nicotinamidase id=1852944 bin=GWE2_Bacteroidetes_39_28 species=Fretibacterium fastidiosum genus=Fretibacterium taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_27
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

31360..32331
DNA (972bp) protein (324aa)
Glucokinase id=3653023 bin=GWF2_Bacteroidetes_41_61 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_28

Not on your lists

32312..33466
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YHD4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD31918.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_109_curated_29
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

33469..34230
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y3E4_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
SCNpilot_bf_inoc_scaffold_109_curated_30
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

34187..36319
DNA (2133bp) protein (711aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y3Y5_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
Displaying items 1-30 of 133 in total

View Taxonomy