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SCNpilot_expt_1000_bf_scaffold_66_curated

Search features with annotation key words

Displaying items 1-30 of 402 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_66_curated_1
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1..2349)
DNA (2349bp) protein (783aa)
PDK repeat-containing protein id=4045200 bin=GWF2_Bacteroidetes_38_335 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_expt_1000_bf_scaffold_66_curated_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2588..3883
DNA (1296bp) protein (432aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F3698
X-Pro aminopeptidase {ECO:0000313|EMBL:KIC90441.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_66_curated_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3957..5078)
DNA (1122bp) protein (374aa)
DNA polymerase III subunit beta; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase III subunit beta n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDU9_NIAKG
SCNpilot_expt_1000_bf_scaffold_66_curated_4
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5147..5809)
DNA (663bp) protein (221aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VN23_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX76917.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
SCNpilot_expt_1000_bf_scaffold_66_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(5882..8506)
DNA (2625bp) protein (875aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7]
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Alanine--tRNA ligase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMH3_NIAKG
SCNpilot_expt_1000_bf_scaffold_66_curated_6
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

8738..10405
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KPX2_HALH1
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_66_curated_7
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10701..11246
DNA (546bp) protein (182aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMY2_RUNSL
alkylhydroperoxidase-like protein
SCNpilot_expt_1000_bf_scaffold_66_curated_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11314..11724
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003688BE4
hypothetical protein; K09958 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB42183.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_expt_1000_bf_scaffold_66_curated_9
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11721..12605
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037E6E38
AraC family transcriptional regulator {ECO:0000313|EMBL:KIA85798.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
AraC family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_66_curated_10
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12672..14711
DNA (2040bp) protein (680aa)
Double-transmembrane region domain protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L6F4_HALH1
double-transmembrane region domain-containing protein
Double-transmembrane region domain protein {ECO:0000313|EMBL:AEE48836.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_expt_1000_bf_scaffold_66_curated_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

14717..15964
DNA (1248bp) protein (416aa)
dihydroorotase, multifunctional complex type; K01465 dihydroorotase [EC:3.5.2.3]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003622526
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_66_curated_12
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15969..16475
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000374543C
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_expt_1000_bf_scaffold_66_curated_13
unknown

Not on your lists

16500..17051
DNA (552bp) protein (184aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_66_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17059..18003
DNA (945bp) protein (315aa)
Glycosyl transferase family 2 n=1 Tax=Niabella soli DSM 19437 RepID=H1NNJ5_9SPHI
Glycosyl transferase family 2 {ECO:0000313|EMBL:AHF15262.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
family 2 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_66_curated_15
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(18000..20270)
DNA (2271bp) protein (757aa)
Outer membrane cobalamin receptor protein id=4302513 bin=GWC2_Bacteroidetes_40_13 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
TonB-dependent receptor plug; K02014 iron complex outermembrane recepter protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_66_curated_16
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20351..21676)
DNA (1326bp) protein (442aa)
hypothetical protein
Uncharacterized protein id=4125709 bin=GWF2_Bacteroidetes_41_31 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_66_curated_17
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21773..22762)
DNA (990bp) protein (330aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
Aspartate-semialdehyde dehydrogenase n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11YT4_CYTH3
SCNpilot_expt_1000_bf_scaffold_66_curated_18
unknown

Not on your lists

22949..23395
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_66_curated_19
Legionella longbeachae, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23423..25237)
DNA (1815bp) protein (605aa)
zinc-dependent metallopeptidase (EC:3.4.15.1); K01283 peptidyl-dipeptidase A [EC:3.4.15.1]
Putative zinc-dependent metallopeptidase {ECO:0000313|EMBL:CBJ12366.1}; EC=3.4.15.1 {ECO:0000313|EMBL:CBJ12366.1};; TaxID=661367 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella longbeachae serogroup 1 (strain NSW150).;"
Dipeptidyl carboxydipeptidase family protein n=2 Tax=Legionella longbeachae RepID=D1RM29_LEGLO
SCNpilot_expt_1000_bf_scaffold_66_curated_20
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(25304..26596)
DNA (1293bp) protein (431aa)
Peptidase M28 n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUE6_PEDHD
peptidase M28
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_66_curated_21
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26764..28674
DNA (1911bp) protein (637aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R913_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV33621.1}; Flags: Precursor;; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
SCNpilot_expt_1000_bf_scaffold_66_curated_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28763..30880
DNA (2118bp) protein (706aa)
Ferrous iron transport protein B n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJU1_CHIPD
ferrous iron transport protein B; K04759 ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:ACU58282.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_66_curated_23
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

31025..32077
DNA (1053bp) protein (351aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036824F0
integral membrane sensor signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_66_curated_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32234..32563)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036C88BE
Heme biosynthesis protein HemY {ECO:0000313|EMBL:KIC95255.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein
SCNpilot_expt_1000_bf_scaffold_66_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32612..33817)
DNA (1206bp) protein (402aa)
cysteine desulfurase IscS; K04487 cysteine desulfurase [EC:2.8.1.7]
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Cysteine desulfurase IscS n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJX0_NIAKG
SCNpilot_expt_1000_bf_scaffold_66_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33931..34911)
DNA (981bp) protein (327aa)
GSCFA domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR03_NIAKG
GSCFA domain-containing protein
GSCFA domain protein {ECO:0000313|EMBL:AEV97902.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_66_curated_27
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

35096..35803
DNA (708bp) protein (236aa)
endopeptidase Clp; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease ClpP n=1 Tax=Segetibacter koreensis RepID=UPI00037A5DF3
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_66_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35864..37333)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIQ0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02903.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_66_curated_29
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37330..37833)
DNA (504bp) protein (168aa)
sixA; phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-] id=14624244 bin=bin5_DeltaP species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
phosphohistidine phosphatase SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
Tax=CSP1_8_Deltaproteobacteria
SCNpilot_expt_1000_bf_scaffold_66_curated_30
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37835..38593)
DNA (759bp) protein (253aa)
UDP-2,3-diacylglucosamine hydrolase; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
Putative UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CIF8_ROBBH
UDP-2,3-diacylglucosamine hydrolase {ECO:0000313|EMBL:KIC96075.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Displaying items 1-30 of 402 in total

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