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SCNpilot_expt_1000_bf_scaffold_801_curated

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_801_curated_1
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2..895)
DNA (894bp) protein (298aa)
Uncharacterized protein {ECO:0000313|EMBL:KGO93695.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
SCNpilot_expt_1000_bf_scaffold_801_curated_2
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1009..5820)
DNA (4812bp) protein (1604aa)
PDK repeat-containing protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R4B7_OWEHD
Uncharacterized protein {ECO:0000313|EMBL:KGO93694.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
PDK repeat-containing protein
SCNpilot_expt_1000_bf_scaffold_801_curated_3
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6186..6857
DNA (672bp) protein (224aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y059_9SPHI
Ligand-binding protein SH3 {ECO:0000313|EMBL:KJD36298.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
LuxR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_801_curated_4
Salinisphaera shabanensis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7237..7731)
DNA (495bp) protein (165aa)
5-methylcytosine-specific restriction enzyme McrB related protein n=1 Tax=Salinisphaera shabanensis E1L3A RepID=U2FVP5_9GAMM
5-methylcytosine-specific restriction enzyme McrB related protein {ECO:0000313|EMBL:ERJ19974.1}; TaxID=1033802 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera shabanensis E1L3A.;"
SCNpilot_expt_1000_bf_scaffold_801_curated_5
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7790..10348
DNA (2559bp) protein (853aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000376D059
Uncharacterized protein {ECO:0000313|EMBL:GAL86910.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_801_curated_6
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

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10723..11148
DNA (426bp) protein (142aa)
hypothetical protein
hypothetical protein id=7718589 bin=BACIGN_2 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
SCNpilot_expt_1000_bf_scaffold_801_curated_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11308..11985
DNA (678bp) protein (226aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBM8_NIAKG
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEV97138.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_801_curated_8
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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11982..13229
DNA (1248bp) protein (416aa)
Signal transduction histidine kinase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVB2_SOLCM
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFD06170.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_801_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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13273..14514
DNA (1242bp) protein (414aa)
Outer membrane protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TES0_NIAKG
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:AEW00506.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_801_curated_10
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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14522..15448
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B776A4
Uncharacterized protein {ECO:0000313|EMBL:KIA84128.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
RND family efflux transporter MFP subunit
SCNpilot_expt_1000_bf_scaffold_801_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15455..18499
DNA (3045bp) protein (1015aa)
Acriflavin resistance protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TER8_NIAKG
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AEW00504.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_801_curated_12
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18581..21097
DNA (2517bp) protein (839aa)
Uncharacterized protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KHA2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH03505.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
SCNpilot_expt_1000_bf_scaffold_801_curated_13
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21408..21980
DNA (573bp) protein (191aa)
Beta-lactamase domain protein n=1 Tax=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) RepID=A4XN16_CALS8
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABP68301.1}; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
SCNpilot_expt_1000_bf_scaffold_801_curated_14
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22793..24484
DNA (1692bp) protein (564aa)
Uncharacterized protein n=1 Tax=Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134) RepID=I3Z1Q0_BELBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL83168.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain DSM 15883 / CIP 108006 / LMG 21964 / BA134).;"
SCNpilot_expt_1000_bf_scaffold_801_curated_15
unknown

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comp(24537..25256)
DNA (720bp) protein (240aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_801_curated_16
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

25458..26141
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EP95_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_801_curated_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(26353..29337)
DNA (2985bp) protein (995aa)
Cell surface protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSE7_METAC
cell surface protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
SCNpilot_expt_1000_bf_scaffold_801_curated_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(29520..29849)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2T5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ79029.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying 18 items

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