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SCNpilot_expt_1000_bf_scaffold_86_curated

Search features with annotation key words

Displaying items 1-30 of 195 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_86_curated_1
unknown

Not on your lists

208..819
DNA (612bp) protein (204aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_86_curated_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(841..1503)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEY9_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59716.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_86_curated_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1665..2759
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PEZ0_CHIPD
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning
Uncharacterized protein {ECO:0000313|EMBL:ACU59717.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_86_curated_4
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2814..3575
DNA (762bp) protein (254aa)
Putative uncharacterized protein id=4667147 bin=GWF2_Melioribacter_38_21 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
SCNpilot_expt_1000_bf_scaffold_86_curated_5
unknown

Not on your lists

comp(3572..3895)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_86_curated_6
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3888..5582)
DNA (1695bp) protein (565aa)
Transporter, SSS family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8D3_9FLAO
Sodium:solute symporter {ECO:0000313|EMBL:KIA94087.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
Na+/solute symporter
SCNpilot_expt_1000_bf_scaffold_86_curated_7
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5684..8143)
DNA (2460bp) protein (820aa)
N-acetylglucosaminylphosphatidylinositol deacetylase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8D2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIC62194.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
LmbE family protein
SCNpilot_expt_1000_bf_scaffold_86_curated_8
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8220..9062)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ET23_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK02826.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_expt_1000_bf_scaffold_86_curated_9
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9180..9476
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAH6_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61180.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_86_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9508..10308
DNA (801bp) protein (267aa)
orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
Orotidine 5'-phosphate decarboxylase n=1 Tax=Niabella soli DSM 19437 RepID=H1NN87_9SPHI
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:AHF15341.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_86_curated_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10332..11609
DNA (1278bp) protein (426aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037CDD62
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25185.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_86_curated_12
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11589..11996)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036CF102
OsmC family protein {ECO:0000313|EMBL:AKD02997.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
OsmC family protein
SCNpilot_expt_1000_bf_scaffold_86_curated_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12049..12870
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC78_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59461.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_86_curated_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12892..13821
DNA (930bp) protein (310aa)
lipoyl synthase; K03644 lipoic acid synthetase [EC:2.8.1.8]
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM;
Lipoyl synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC79_CHIPD
SCNpilot_expt_1000_bf_scaffold_86_curated_15
unknown

Not on your lists

comp(13864..14565)
DNA (702bp) protein (234aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_86_curated_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14645..15199)
DNA (555bp) protein (185aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPZ6_NIAKG
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AEV99990.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_86_curated_17
RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15306..16565
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GL86_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_31_7_curated
SCNpilot_expt_1000_bf_scaffold_86_curated_18
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16879..19764
DNA (2886bp) protein (962aa)
TonB-dependent receptor id=4409714 bin=GWF2_Bacteroidetes_35_48 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
TonB-dependent receptor plug
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_expt_1000_bf_scaffold_86_curated_19
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19863..21731
DNA (1869bp) protein (623aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XNJ7_9BACT
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
SCNpilot_expt_1000_bf_scaffold_86_curated_20
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(21781..22563)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI000380C706
Uncharacterized protein {ECO:0000313|EMBL:GAL84713.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein; K06966
SCNpilot_expt_1000_bf_scaffold_86_curated_21
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22650..23282)
DNA (633bp) protein (211aa)
Peptidase n=1 Tax=Polaribacter sp. MED152 RepID=A2U2H7_9FLAO
peptidase
Peptidase {ECO:0000313|EMBL:EAQ41343.2}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED152.;"
SCNpilot_expt_1000_bf_scaffold_86_curated_22
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23429..23617
DNA (189bp) protein (63aa)
CsbD family protein n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4A3_PEDSD
CsbD family protein
CsbD family protein {ECO:0000313|EMBL:ADY50860.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_expt_1000_bf_scaffold_86_curated_23
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23670..24233)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GKV5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH54531.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_86_curated_24
unknown

Not on your lists

24397..24579
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_86_curated_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24581..24913)
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F061C
Uncharacterized protein {ECO:0000313|EMBL:AHF16161.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_86_curated_26
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

comp(25044..25232)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q2U5_9BACT
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_expt_1000_bf_scaffold_86_curated_27
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25250..26113)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CIC0_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EOR28755.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_86_curated_28
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26257..26910)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LEQ2_BURGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA61069.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
SCNpilot_expt_1000_bf_scaffold_86_curated_29
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26992..27504
DNA (513bp) protein (171aa)
GCN5-related N-acetyltransferase n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QR99_SPILD
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADB39653.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_expt_1000_bf_scaffold_86_curated_30
Weeksella virosa, Weeksella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27598..28890
DNA (1293bp) protein (431aa)
NADH dehydrogenase (ubiquinone) (EC:1.6.5.3); K03885 NADH dehydrogenase [EC:1.6.99.3]
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:ADX68758.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ADX68758.1};; TaxID=865938 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Weeksella.;" source="Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC; 16016 / NCTC 11634 / CL345/78).;"
NADH dehydrogenase (Ubiquinone) n=1 Tax=Weeksella virosa (strain ATCC 43766 / DSM 16922 / JCM 21250 / NBRC 16016 / NCTC 11634 / CL345/78) RepID=F0P1W1_WEEVC
Displaying items 1-30 of 195 in total

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