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SCNpilot_cont_1000_p_scaffold_2866_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2866_curated_1
R_RIF_OD1_09_47_33b, RIF-OD1-9, Parcubacteria, Bacteria

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3..353
DNA (351bp) protein (117aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_47_33b_curated
SCNpilot_cont_1000_p_scaffold_2866_curated_2
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

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353..3376
DNA (3024bp) protein (1008aa)
Predicted ATPase id=1879617 bin=GWE2_Bacteroidetes_42_39 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
ATPase
Tax=BJP_IG2102_BRC1_58_13
SCNpilot_cont_1000_p_scaffold_2866_curated_3
unknown

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comp(3379..3666)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2866_curated_4
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3697..3960)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EJ40_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM34554.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
SCNpilot_cont_1000_p_scaffold_2866_curated_5
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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4053..4442
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00035DBEB1
hypothetical protein
Tax=GWF2_Bacteroidetes_38_335_curated
SCNpilot_cont_1000_p_scaffold_2866_curated_6
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4573..5706)
DNA (1134bp) protein (378aa)
hemolysin D n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5BE1D
Nickel and cobalt resistance protein CnrB {ECO:0000313|EMBL:KHJ38224.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
efflux transporter, RND family, MFP subunit
SCNpilot_cont_1000_p_scaffold_2866_curated_7
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5711..10072)
DNA (4362bp) protein (1454aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVM3_EMTOG
Cobalt-zinc-cadmium resistance protein CzcA {ECO:0000313|EMBL:KHJ38223.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
heavy metal efflux pump, CzcA family
SCNpilot_cont_1000_p_scaffold_2866_curated_8
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10168..10581)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W190_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KHJ38222.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2866_curated_9
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10692..11450)
DNA (759bp) protein (253aa)
3-oxo-5-alpha-steroid 4-dehydrogenase (EC:1.3.99.5)
3-oxo-5-alpha-steroid 4-dehydrogenase id=4132523 bin=GWF2_Bacteroidetes_49_14 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Tax=RBG_13_Bacteroidetes_46_8_curated
SCNpilot_cont_1000_p_scaffold_2866_curated_10
unknown

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comp(11519..11737)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2866_curated_11
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11836..12180)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2J1I7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL61970.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;"
bleomycin resistance protein
SCNpilot_cont_1000_p_scaffold_2866_curated_12
unknown

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comp(12279..12461)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 12 items

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