ggKbase home page

SCNpilot_cont_1000_p_scaffold_731_curated

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_731_curated_1
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..500)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Porphyromonas levii RepID=UPI000381D8D6
Uncharacterized protein {ECO:0000313|EMBL:EKU90288.1}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
SCNpilot_cont_1000_p_scaffold_731_curated_2
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

954..1718
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7XBL2_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPR73393.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogradskyella psychrotolerans RS-3.;"
SCNpilot_cont_1000_p_scaffold_731_curated_3
Aequorivita sublithincola, Aequorivita, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1751..3772
DNA (2022bp) protein (674aa)
Uncharacterized protein n=1 Tax=Myroides odoratimimus CCUG 12700 RepID=S3Y6D8_9FLAO
reverse transcriptase
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:AFL80505.1}; TaxID=746697 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aequorivita.;" source="Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 /; 9-3).;"
SCNpilot_cont_1000_p_scaffold_731_curated_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


3930..6569
DNA (2640bp) protein (880aa)
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PI83_CHIPD
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_731_curated_5
unknown

Not on your lists

6684..7181
DNA (498bp) protein (166aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_731_curated_6
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

Not on your lists

comp(7186..8133)
DNA (948bp) protein (316aa)
hypothetical protein ; K01476 arginase [EC:3.5.3.1]
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7TB23_NEMVE
SCNpilot_cont_1000_p_scaffold_731_curated_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8193..10598)
DNA (2406bp) protein (802aa)
Surface antigen (D15) n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUD0_CHIPD
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:ACU59170.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_731_curated_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10649..11386
DNA (738bp) protein (246aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUD1_CHIPD
tRNA/rRNA methyltransferase SpoU; K03437 RNA methyltransferase, TrmH family
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ACU59171.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_731_curated_9
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

11458..12240
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IJH9_FLUTR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_731_curated_10
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12250..12831)
DNA (582bp) protein (194aa)
Putative membrane-associated phospholipid phosphatase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GNI2_9SPHI
Putative membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:EOR93251.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
PA-phosphatase-like phosphoesterase
SCNpilot_cont_1000_p_scaffold_731_curated_11
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(12833..13567)
DNA (735bp) protein (245aa)
Methyltransferase type 11 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y8Z8_9SPHI
methyltransferase type 11
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_p_scaffold_731_curated_12
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(13660..15087)
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000346BEA8
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABA24565.1}; Flags: Precursor;; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).;"
SCNpilot_cont_1000_p_scaffold_731_curated_13
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15128..15946)
DNA (819bp) protein (273aa)
NQR2, RnfD, RnfE family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QH15_9CYAN
NQR2, RnfD, RnfE family protein {ECO:0000313|EMBL:ERT06552.1}; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya aestuarii BL J.;"
Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB
SCNpilot_cont_1000_p_scaffold_731_curated_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16034..16726
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMS2_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58616.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_731_curated_15
unknown

Not on your lists

comp(16808..17362)
DNA (555bp) protein (185aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_731_curated_16
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17364..18632)
DNA (1269bp) protein (423aa)
major facilitator transporter n=1 Tax=Gillisia marina RepID=UPI00029ABFFB
Glucose/galactose transporter {ECO:0000313|EMBL:EHQ02712.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
glucose/galactose transporter
SCNpilot_cont_1000_p_scaffold_731_curated_17
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18727..19668
DNA (942bp) protein (314aa)
glucokinase (EC:2.7.1.2)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IUB7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03193.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
SCNpilot_cont_1000_p_scaffold_731_curated_18
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19670..20401)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W8N5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK33763.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_731_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20495..21304
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003788A67
OmpA/MotB domain-containing protein; K02557 chemotaxis protein MotB
OmpA/MotB domain protein {ECO:0000313|EMBL:AEV97736.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_731_curated_20
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21357..23720)
DNA (2364bp) protein (788aa)
TonB-dependent receptor plug n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FGW4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJF44882.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
TonB-dependent receptor plug
SCNpilot_cont_1000_p_scaffold_731_curated_21
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

23910..25034
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N9E9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMR03887.1}; TaxID=1279009 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_731_curated_22
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(25058..25897)
DNA (840bp) protein (280aa)
Putative hemagglutinin/hemolysin-related protein id=2748906 bin=GWF2_WWE1_40_14 species=unknown genus=Lyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_WWE1_40_14 organism_group=WWE1
Tax=GWF2_WWE1X_40_14_curated
SCNpilot_cont_1000_p_scaffold_731_curated_23
unknown

Not on your lists

comp(25967..26134)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_731_curated_24
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


26167..26790
DNA (624bp) protein (208aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Fl
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
Non-canonical purine NTP pyrophosphatase n=2 Tax=Myroides RepID=H1ZAQ7_MYROD
SCNpilot_cont_1000_p_scaffold_731_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26790..27782
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF92_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97302.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_731_curated_26
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27772..28080)
DNA (309bp) protein (103aa)
Thioredoxin n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUP0_PEDHD
Contig65, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76345.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
thioredoxin; K03671 thioredoxin 1
SCNpilot_cont_1000_p_scaffold_731_curated_27
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28121..28426)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Mariniradius saccharolyticus AK6 RepID=M7XLL6_9BACT
Phosphoribosylpyrophosphate synthetase {ECO:0000313|EMBL:KIC96201.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
phosphoribosylpyrophosphate synthetase
SCNpilot_cont_1000_p_scaffold_731_curated_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28596..29984
DNA (1389bp) protein (463aa)
Magnesium transporter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPC6_NIAKG
magnesium transporter; K06213 magnesium transporter
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_731_curated_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30103..30741
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003829540
Uncharacterized protein {ECO:0000313|EMBL:GAO42174.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_731_curated_30
Deinococcus gobiensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(30810..32441)
DNA (1632bp) protein (544aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI000378A4F9
hypothetical protein; K07004
Uncharacterized protein {ECO:0000313|EMBL:AFD24571.1}; TaxID=745776 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 /; I-0).;"
Displaying items 1-30 of 42 in total

View Taxonomy