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SCNpilot_cont_1000_p_scaffold_392_curated

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Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_392_curated_1
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..599
DNA (597bp) protein (199aa)
Phage/plasmid-related protein TIGR03299 n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FS12_9SPHI
Phage/plasmid-related protein TIGR03299 {ECO:0000313|EMBL:EEI94377.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33300.;"
phage/plasmid-related protein tigr03299
SCNpilot_cont_1000_p_scaffold_392_curated_2
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

650..922
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZ67_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24652.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_cont_1000_p_scaffold_392_curated_3
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

941..1318
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YDT5_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ24275.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_392_curated_4
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1330..1668
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VT22_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK56923.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
SCNpilot_cont_1000_p_scaffold_392_curated_5
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1680..1913
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RS69_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16721.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
SCNpilot_cont_1000_p_scaffold_392_curated_6
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1975..2640
DNA (666bp) protein (222aa)
Prtrc system protein e n=1 Tax=Flavobacterium sp. F52 RepID=J1KVW9_9FLAO
Prtrc system protein e {ECO:0000313|EMBL:AIM38416.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
prtrc system protein e
SCNpilot_cont_1000_p_scaffold_392_curated_7
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2653..2871
DNA (219bp) protein (73aa)
PRTRC system protein C n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W5D6_9FLAO
PRTRC system protein C {ECO:0000313|EMBL:KFC22366.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_392_curated_8
Sphingobacterium sp. ML3W, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2889..4064
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G273_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AIM35306.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_392_curated_9
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4061..4777
DNA (717bp) protein (239aa)
PRTRC system protein B n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VNK0_9SPHI
PRTRC system protein B {ECO:0000313|EMBL:EFK57497.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_392_curated_10
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4774..5577
DNA (804bp) protein (268aa)
thiazole biosynthesis adenylyltransferase ThiF n=1 Tax=Empedobacter brevis RepID=UPI00035C8E38
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:KGO08730.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
uba/thif-type nad/fad binding protein
SCNpilot_cont_1000_p_scaffold_392_curated_11
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5962..8361
DNA (2400bp) protein (800aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036EEF37
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB36216.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_1000_p_scaffold_392_curated_12
unknown

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8514..9020
DNA (507bp) protein (169aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_392_curated_13
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

9286..10179
DNA (894bp) protein (298aa)
Uncharacterized protein id=4161675 bin=GWF2_Bacteroidetes_41_31 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_392_curated_14
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10226..11938
DNA (1713bp) protein (571aa)
Bilirubin oxidase (EC:1.3.3.5)
Bilirubin oxidase id=4569926 bin=GWC2_Ignavibacteria_38_9 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
SCNpilot_cont_1000_p_scaffold_392_curated_15
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11983..13338
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI000362734D
Uncharacterized protein {ECO:0000313|EMBL:KIG17807.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_392_curated_16
Chondrus crispus, Chondrus, Gigartinales, Florideophyceae, Eukaryota

Not on your lists

13455..13949
DNA (495bp) protein (165aa)
Stackhouse genomic scaffold, scaffold_101 n=1 Tax=Chondrus crispus RepID=R7Q451_CHOCR
Stackhouse genomic scaffold, scaffold_101 {ECO:0000313|EMBL:CDF32648.1}; TaxID=2769 species="Eukaryota; Rhodophyta; Florideophyceae; Gigartinales; Gigartinaceae; Chondrus.;" source="Chondrus crispus (Carrageen Irish moss) (Polymorpha crispa).;"
SCNpilot_cont_1000_p_scaffold_392_curated_17
Sphingobacterium sp. PM2-P1-29, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14125..14721
DNA (597bp) protein (199aa)
Transcriptional regulator, AraC family n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFI6_FLUTR
Regulator with DNA binding domain protein {ECO:0000313|EMBL:CDT31694.1}; TaxID=403776 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. PM2-P1-29.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_392_curated_18
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

14967..15599
DNA (633bp) protein (211aa)
Putative lipoprotein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FVT8_9FLAO
lipoprotein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_392_curated_19
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15670..15888
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00035F92B0
Membrane protein {ECO:0000313|EMBL:KIA85219.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein; K08982 putative membrane protein
SCNpilot_cont_1000_p_scaffold_392_curated_20
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16060..17457
DNA (1398bp) protein (466aa)
Putative exonuclease of the beta-lactamase fold involved in RNA processing n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JS10_9FLAO
Beta-lactamase family protein {ECO:0000313|EMBL:BAP32410.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein; K07576 metallo-beta-lactamase family protein
SCNpilot_cont_1000_p_scaffold_392_curated_21
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17450..18958
DNA (1509bp) protein (503aa)
Thymidine phosphorylase n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FUC2_9FLAO
Thymidine phosphorylase {ECO:0000313|EMBL:KJJ39403.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladivostokensis.;"
thymidine phosphorylase
SCNpilot_cont_1000_p_scaffold_392_curated_22
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18955..19836
DNA (882bp) protein (294aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SGI3_9FLAO
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:ESU25818.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
SCNpilot_cont_1000_p_scaffold_392_curated_23
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

20263..21552
DNA (1290bp) protein (430aa)
Putative silver efflux pump n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUT4_SOLCM
putative silver efflux pump
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_392_curated_24
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

21545..23470
DNA (1926bp) protein (642aa)
Acriflavin resistance protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ER40_RUNSL
acriflavin resistance protein; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_392_curated_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

23475..24752
DNA (1278bp) protein (426aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11UZ2_CYTH3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_392_curated_26
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

24749..25954
DNA (1206bp) protein (402aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ER38_RUNSL
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_392_curated_27
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

25964..27076
DNA (1113bp) protein (371aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TA62_NIAKG
RND family efflux transporter MFP subunit; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_392_curated_28
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27140..27343
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FWJ0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KJS04388.1}; TaxID=1629721 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
SCNpilot_cont_1000_p_scaffold_392_curated_29
Robiginitalea biformata, Robiginitalea, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27324..27602
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CGX8_ROBBH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAR16186.1}; TaxID=313596 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Robiginitalea.;" source="Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146).;"
SCNpilot_cont_1000_p_scaffold_392_curated_30
Leptospira sp. B5-022, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

27629..30322
DNA (2694bp) protein (898aa)
ATPase, p-type (transporting), had superfamily, subfamily ic (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8]
Putative calcium-translocating P-type ATPase, PMCA-type n=1 Tax=Leptospira sp. B5-022 RepID=M6D9A0_9LEPT
Putative calcium-translocating P-type ATPase, PMCA-type {ECO:0000313|EMBL:EMK00475.1}; TaxID=1242992 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira sp. B5-022.;"
Displaying items 1-30 of 89 in total

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