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SCNpilot_cont_1000_p_scaffold_654_curated

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_654_curated_1
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

Not on your lists

268..1431
DNA (1164bp) protein (388aa)
Uncharacterized protein id=1769742 bin=GWE2_Spirochaete_31_10 species=Methanobacterium formicicum genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Spirochaetes_31_10_curated
SCNpilot_cont_1000_p_scaffold_654_curated_2
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

1428..1919
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2R330_METFO
Uncharacterized protein {ECO:0000313|EMBL:EKF86938.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium formicicum DSM 3637.;"
SCNpilot_cont_1000_p_scaffold_654_curated_3
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

1930..3864
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Bacillus mycoides Rock1-4 RepID=C3AXA2_BACMY
hypothetical protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
SCNpilot_cont_1000_p_scaffold_654_curated_4
unknown

Not on your lists

comp(3899..4141)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_654_curated_5
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4250..4948
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI00037F9330
Uncharacterized protein {ECO:0000313|EMBL:EZH72684.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_654_curated_6
Octadecabacter arcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5046..6215)
DNA (1170bp) protein (390aa)
Putative integrase n=1 Tax=Octadecabacter arcticus 238 RepID=M9RV73_9RHOB
putative integrase
Putative integrase {ECO:0000313|EMBL:AGI73760.1}; TaxID=391616 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter arcticus 238.;"
SCNpilot_cont_1000_p_scaffold_654_curated_7
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7003..9180
DNA (2178bp) protein (726aa)
TonB-dependent receptor plug n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXH2_LEAB4
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:CEN47954.1}; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
tonb-dependent receptor plug; K02014 iron complex outermembrane recepter protein
SCNpilot_cont_1000_p_scaffold_654_curated_8
unknown

Not on your lists

9177..9626
DNA (450bp) protein (150aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_654_curated_9
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9643..10437
DNA (795bp) protein (265aa)
Cobalt-zinc-cadmium resistance protein id=2606426 bin=GWF1_Flavobacteria_32_7 species=Riemerella anatipestifer genus=Riemerella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
cation efflux protein
Cation efflux protein {ECO:0000313|EMBL:ABQ93653.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. (strain PRwf-1).;"
SCNpilot_cont_1000_p_scaffold_654_curated_10
unknown

Not on your lists

10507..10830
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_654_curated_11
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

11026..11775
DNA (750bp) protein (250aa)
Nucleic acid binding OB-fold tRNA/helicase-type id=2799007 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_cont_1000_p_scaffold_654_curated_12
Mangrovimonas yunxiaonensis, Mangrovimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11786..12862
DNA (1077bp) protein (359aa)
cytochrome-c peroxidase (EC:1.11.1.5); K00428 cytochrome c peroxidase [EC:1.11.1.5]
Cytochrome-c peroxidase n=1 Tax=Lacinutrix sp. (strain 5H-3-7-4) RepID=F6GGZ4_LACS5
Cytochrome C peroxidase {ECO:0000313|EMBL:KFB01461.1}; TaxID=1197477 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Mangrovimonas.;" source="Mangrovimonas yunxiaonensis.;"
SCNpilot_cont_1000_p_scaffold_654_curated_13
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12972..13541
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WYG9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK04301.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_p_scaffold_654_curated_14
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13619..16039
DNA (2421bp) protein (807aa)
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AEA45699.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AEA45699.1};; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFI5_FLUTR
SCNpilot_cont_1000_p_scaffold_654_curated_15
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16119..16331
DNA (213bp) protein (71aa)
Heavy metal-associated protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V7V0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:GAO31159.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_654_curated_16

Not on your lists

16448..16921
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z3W0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD44207.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_654_curated_17
unknown

Not on your lists

16924..17337
DNA (414bp) protein (138aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_654_curated_18
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17409..17996
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C320_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ76872.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_1000_p_scaffold_654_curated_19
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18014..18505
DNA (492bp) protein (164aa)
Heavy metal transport/detoxification protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM96_CHIPD
heavy metal transport/detoxification protein
Uncharacterized protein {ECO:0000313|EMBL:KIC91458.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_1000_p_scaffold_654_curated_20
Flavobacterium frigoris, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18516..19343
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FQA5_9FLAO
Putative uncharacterized protein {ECO:0000313|EMBL:EIA09459.1}; TaxID=1086011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium frigoris PS1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_654_curated_21
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19402..22065
DNA (2664bp) protein (888aa)
Copper-resistance protein CopA n=1 Tax=Pedobacter sp. BAL39 RepID=A6EJ34_9SPHI
Copper-resistance protein CopA {ECO:0000313|EMBL:EDM34548.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
multicopper oxidase type 3
SCNpilot_cont_1000_p_scaffold_654_curated_22
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22312..22515
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QCK9_SPILD
Excisionase {ECO:0000313|EMBL:KGD69605.1}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_654_curated_23
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

22599..23504
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QCL0_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB38015.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_cont_1000_p_scaffold_654_curated_24
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23491..23904
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2L7X1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKF06381.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_654_curated_25
unknown

Not on your lists

comp(23918..24109)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_654_curated_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24136..25038
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJI1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63741.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_654_curated_27
unknown

Not on your lists

25142..25549
DNA (408bp) protein (136aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_654_curated_28
unknown

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comp(25533..26357)
DNA (825bp) protein (275aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_654_curated_29
unknown

Not on your lists

comp(26363..26530)
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_654_curated_30
unknown

Not on your lists

comp(26635..27015)
DNA (381bp) protein (127aa)

This feature has no annotations

Displaying items 1-30 of 57 in total

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