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scnpilot_p_inoc_scaffold_194_curated

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_194_curated_1
unknown

Not on your lists

347..859
DNA (513bp) protein (171aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_194_curated_2
unknown

Not on your lists

1100..1759
DNA (660bp) protein (220aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_194_curated_3
unknown

Not on your lists

1815..2480
DNA (666bp) protein (222aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_194_curated_4
unknown

Not on your lists

2626..3267
DNA (642bp) protein (214aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_194_curated_5
unknown

Not on your lists

3325..3906
DNA (582bp) protein (194aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_194_curated_6
Nonlabens ulvanivorans, Nonlabens, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

4366..4536
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKD1_9SPHI
DNA polymerase III subunit alpha {ECO:0000313|EMBL:KEZ93795.1}; Uncharacterized protein {ECO:0000313|EMBL:GAK77455.1}; TaxID=906888 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Nonlabens.;" source="Nonlabens ulvanivorans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_194_curated_7
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4789..7209
DNA (2421bp) protein (807aa)
Uncharacterized protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYH4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY24558.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
PDK repeat-containing protein
scnpilot_p_inoc_scaffold_194_curated_8
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7461..9290
DNA (1830bp) protein (610aa)
PDK repeat-containing protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C7F6_9FLAO
PDK repeat-containing protein {ECO:0000313|EMBL:EIJ39549.1}; Flags: Precursor;; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marina DSM 19592.;"
hypothetical protein
scnpilot_p_inoc_scaffold_194_curated_9
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9494..10522)
DNA (1029bp) protein (343aa)
Response regulator of the LytR/AlgR family n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FYU0_ECHVK
response regulator of the LytR/AlgR family
Response regulator of the LytR/AlgR family {ECO:0000313|EMBL:AGA78208.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
scnpilot_p_inoc_scaffold_194_curated_10
unknown

Not on your lists

10805..11464
DNA (660bp) protein (220aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_194_curated_11
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11839..13500)
DNA (1662bp) protein (554aa)
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=880071 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
Urocanate hydratase n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AID6_FLELS
scnpilot_p_inoc_scaffold_194_curated_12
unknown

Not on your lists

comp(13594..13743)
DNA (150bp) protein (50aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_194_curated_13
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13874..15676)
DNA (1803bp) protein (601aa)
Lysyl endopeptidase id=4551643 bin=GWF2_Bacteroidetes_33_38 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Tax=GWF2_Bacteroidetes_33_38_curated
scnpilot_p_inoc_scaffold_194_curated_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15936..16985)
DNA (1050bp) protein (350aa)
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; K07568 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:5.-.-.-]
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSY7_CHIPD
scnpilot_p_inoc_scaffold_194_curated_15
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17192..18418
DNA (1227bp) protein (409aa)
ornithine aminotransferase; K00819 ornithine--oxo-acid transaminase [EC:2.6.1.13]
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2J4Q7_9SPHI
Ornithine aminotransferase {ECO:0000313|EMBL:KGE12362.1}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ACCC 05744.;"
scnpilot_p_inoc_scaffold_194_curated_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18422..18874
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003693A45
Nuclear protein SET {ECO:0000313|EMBL:KIC94124.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
nuclear protein SET; K07117
scnpilot_p_inoc_scaffold_194_curated_17
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18979..20421)
DNA (1443bp) protein (481aa)
Extracellular nuclease n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6LAT2_SAPGL
extracellular nuclease
Extracellular nuclease {ECO:0000313|EMBL:AFC25675.1}; TaxID=984262 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
scnpilot_p_inoc_scaffold_194_curated_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20575..21753
DNA (1179bp) protein (393aa)
RNA methylase; K06969 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
Putative RNA methylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PR65_CHIPD
Putative RNA methylase {ECO:0000313|EMBL:ACU64304.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_194_curated_19
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21790..22962)
DNA (1173bp) protein (391aa)
Major facilitator superfamily MFS_1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFD8_CHIPD
major facilitator superfamily protein; K08224 MFS transporter, YNFM family, putative membrane transport protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU61643.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
scnpilot_p_inoc_scaffold_194_curated_20
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23041..24201)
DNA (1161bp) protein (387aa)
ABC-2 type transporter n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W168_9FLAO
ABC transporter permease {ECO:0000313|EMBL:KFC18612.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
ABC transporter permease; K09686 antibiotic transport system permease protein
scnpilot_p_inoc_scaffold_194_curated_21
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24203..25165)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W169_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EFK34084.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
ABC transporter membrane fusion efflux protein; K01993 HlyD family secretion protein
scnpilot_p_inoc_scaffold_194_curated_22
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25180..26562)
DNA (1383bp) protein (461aa)
Outer membrane efflux protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W170_9FLAO
Transporter {ECO:0000313|EMBL:KFC18614.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
outer membrane efflux protein
scnpilot_p_inoc_scaffold_194_curated_23
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26570..27025)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI00037D673A
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EFK34086.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
MarR family transcriptional regulator
scnpilot_p_inoc_scaffold_194_curated_24
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27867..29303
DNA (1437bp) protein (479aa)
Cytosol non-specific dipeptidase {ECO:0000313|EMBL:CEN52855.1}; EC=3.4.13.18 {ECO:0000313|EMBL:CEN52855.1};; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
aminoacyl-histidine dipeptidase (EC:3.4.13.3); K01270 dipeptidase D [EC:3.4.13.-]
aminoacyl-histidine dipeptidase n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI000373BE5B
scnpilot_p_inoc_scaffold_194_curated_25
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29324..29707
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BXH6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHQ02058.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
hypothetical protein
scnpilot_p_inoc_scaffold_194_curated_26
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29805..30650)
DNA (846bp) protein (282aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacte
HemK family modification methylase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Modification methylase, HemK family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XXW2_PEDHD
scnpilot_p_inoc_scaffold_194_curated_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30753..32819)
DNA (2067bp) protein (689aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ATP-dependent metalloprotease FtsH; K03798 cell division protease FtsH [EC:3.4.24.-]
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFY1_CHIPD
scnpilot_p_inoc_scaffold_194_curated_28
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32863..33231)
DNA (369bp) protein (123aa)
Iojap-like protein id=3825693 bin=GWF2_Bacteroidetes_33_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
iojap family protein; K09710 ribosome-associated protein
Tax=GWE2_Bacteroidetes_32_14_curated
scnpilot_p_inoc_scaffold_194_curated_29
Prevotella sp. CAG:1031, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33300..34049
DNA (750bp) protein (250aa)
biotin--acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035F5AAD
Uncharacterized protein {ECO:0000313|EMBL:CCX43579.1}; TaxID=1262917 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1031.;"
scnpilot_p_inoc_scaffold_194_curated_30
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34153..34722)
DNA (570bp) protein (190aa)
ahpC; peroxiredoxin (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]
Peroxiredoxin {ECO:0000313|EMBL:ABG60993.1}; EC=1.11.1.15 {ECO:0000313|EMBL:ABG60993.1};; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
alkyl hydroperoxide reductase n=1 Tax=Cytophaga aurantiaca RepID=UPI00036BADD0
Displaying items 1-30 of 136 in total

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