ggKbase home page

SCNpilot_bf_inoc_scaffold_4310_curated

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_bf_inoc_scaffold_4310_curated_1
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..233)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000365CA37
Uncharacterized protein {ECO:0000313|EMBL:EIY62702.1}; TaxID=997886 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL03T12C18.;"
hypothetical protein
SCNpilot_bf_inoc_scaffold_4310_curated_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

477..674
DNA (198bp) protein (66aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI00037A664D
Phage protein Gp37/Gp68 {ECO:0000313|EMBL:EFR53811.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
phage protein Gp37/Gp68
SCNpilot_bf_inoc_scaffold_4310_curated_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

1018..2121
DNA (1104bp) protein (368aa)
SMC domain protein n=2 Tax=Cyanothece RepID=B7JWR2_CYAP8
SMC domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
SCNpilot_bf_inoc_scaffold_4310_curated_4
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2118..2465
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KEI65958.1}; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126/8.;"
Putative uncharacterized protein id=3341118 bin=GWC2_Bacteroidetes_40_13 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
SCNpilot_bf_inoc_scaffold_4310_curated_5
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2723..3247
DNA (525bp) protein (175aa)
cell division protein FtsK n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029AB153
Cell division protein FtsK {ECO:0000313|EMBL:AKD57663.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
cell division DNA translocase FtsK
SCNpilot_bf_inoc_scaffold_4310_curated_6

Not on your lists

comp(3459..4829)
DNA (1371bp) protein (457aa)
ATPase (AAA+ superfamily) n=1 Tax=gut metagenome RepID=J9FY68_9ZZZZ
ATPase (AAA+ superfamily) {ECO:0000313|EMBL:EJW94497.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein; K07133
SCNpilot_bf_inoc_scaffold_4310_curated_7
Bacteroides intestinalis CAG:564, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5574..7100
DNA (1527bp) protein (509aa)
putative type I restriction-modification system, M subunit; K03427 type I restriction enzyme M protein [EC:2.1.1.72]
Putative type I restriction-modification system, M subunit n=2 Tax=Bacteroides RepID=B3CDK8_9BACE
Putative type I restriction-modification system M subunit {ECO:0000313|EMBL:CCY85161.1}; TaxID=1263049 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:564.;"
SCNpilot_bf_inoc_scaffold_4310_curated_8

Not on your lists

7155..8147
DNA (993bp) protein (331aa)
Tyrosine recombinase XerC n=1 Tax=gut metagenome RepID=J9GLD6_9ZZZZ
Tyrosine recombinase XerC {ECO:0000313|EMBL:EJX08697.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
site-specific recombinase, phage integrase family
Displaying 8 items

View Taxonomy