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SCNpilot_cont_300_bf_scaffold_1419_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1419_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..389)
DNA (387bp) protein (129aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-]
Phenolic acid decarboxylase subunit B n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QC85_BREDI
SCNpilot_cont_300_bf_scaffold_1419_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(696..1361)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2G4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95226.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K09987 hypothetical protein
SCNpilot_cont_300_bf_scaffold_1419_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1578..2240
DNA (663bp) protein (221aa)
Beta/Gamma crystallin n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QB83_BREDI
Beta/Gamma crystallin {ECO:0000313|EMBL:EKY25216.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
beta and gamma crystallin
SCNpilot_cont_300_bf_scaffold_1419_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2296..3300)
DNA (1005bp) protein (335aa)
NADPH quinone oxidoreductase, PIG3 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2G2_BREDI
NADPH quinone oxidoreductase, PIG3 family protein {ECO:0000313|EMBL:EGF95224.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
NAD(P)H quinone oxidoreductase, PIG3 family
SCNpilot_cont_300_bf_scaffold_1419_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3333..3563
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2G1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95223.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1419_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3670..4176
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QB70_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY25219.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein; K13592 regulator of CtrA degradation
SCNpilot_cont_300_bf_scaffold_1419_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4219..5775)
DNA (1557bp) protein (519aa)
Putative peptidoglycan binding domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2F9_BREDI
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:EGF95221.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ErfK/YbiS/YcfS/YnhG family protein
SCNpilot_cont_300_bf_scaffold_1419_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5929..6153)
DNA (225bp) protein (75aa)
50S ribosomal protein L31 n=2 Tax=Brevundimonas diminuta RepID=F4R2F8_BREDI
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
SCNpilot_cont_300_bf_scaffold_1419_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6286..8130
DNA (1845bp) protein (615aa)
ABC transporter family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2F7_BREDI
ABC transporter family protein {ECO:0000313|EMBL:EGF95219.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
lipid A ABC exporter family, fused ATPase and inner membrane subunits; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_cont_300_bf_scaffold_1419_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8159..9199)
DNA (1041bp) protein (347aa)
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EGF95218.1}; EC=3.1.4.46 {ECO:0000313|EMBL:EGF95218.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2F6_BREDI
SCNpilot_cont_300_bf_scaffold_1419_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9469..10275)
DNA (807bp) protein (269aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
Inositol monophosphatase family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAU7_BREDI
Inositol monophosphatase family protein {ECO:0000313|EMBL:EKY25066.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_1419_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10408..10974)
DNA (567bp) protein (189aa)
Elongation factor P n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QBS5_BREDI
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
translation elongation factor P; K02356 elongation factor P
SCNpilot_cont_300_bf_scaffold_1419_curated_13
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11102..11638)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W9Z4_9CAUL
TspO/MBR family protein
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCNpilot_cont_300_bf_scaffold_1419_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11712..12212)
DNA (501bp) protein (167aa)
Ferroxidase {ECO:0000256|PIRNR:PIRNR002560}; EC=1.16.3.1 {ECO:0000256|PIRNR:PIRNR002560};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Bacterioferritin n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QAS2_BREDI
bacterioferritin; K03594 bacterioferritin
SCNpilot_cont_300_bf_scaffold_1419_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12379..12564)
DNA (186bp) protein (62aa)
BFD-like 2Fe-2S binding domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2F4_BREDI
BFD-like 2Fe-2S binding domain protein {ECO:0000313|EMBL:EGF95216.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
BFD domain-containing protein (2Fe-2S)-binding domain-containing protein; K02192 bacterioferritin-associated ferredoxin
SCNpilot_cont_300_bf_scaffold_1419_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12682..13143
DNA (462bp) protein (154aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundi
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2F3_BREDI
Displaying 16 items

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