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SCNpilot_cont_300_bf_scaffold_2250_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2250_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..854
DNA (852bp) protein (284aa)
Putative 3-phenylpropionic acid transporter n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1Q8_BREDI
Putative 3-phenylpropionic acid transporter {ECO:0000313|EMBL:EGF94300.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
major facilitator superfamily protein; K05820 MFS transporter, PPP family, 3-phenylpropionic acid transporter
SCNpilot_cont_300_bf_scaffold_2250_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(840..1439)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1Q9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94301.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2250_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1561..4137)
DNA (2577bp) protein (859aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFI2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY26754.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2250_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4225..4407)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1R1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94303.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2250_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4649..6037
DNA (1389bp) protein (463aa)
Phospholipase D family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1R2_BREDI
Phospholipase D family protein {ECO:0000313|EMBL:EGF94304.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
phospholipase D/transphosphatidylase
SCNpilot_cont_300_bf_scaffold_2250_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6022..6777)
DNA (756bp) protein (252aa)
Endonuclease/Exonuclease/phosphatase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1R3_BREDI
Endonuclease/Exonuclease/phosphatase family protein {ECO:0000313|EMBL:EGF94305.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
endonuclease/exonuclease/phosphatase; K06896
SCNpilot_cont_300_bf_scaffold_2250_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6860..7396)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1R4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94306.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K08988 putative membrane protein
SCNpilot_cont_300_bf_scaffold_2250_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7375..8382)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGG1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY26760.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein; K06872 uncharacterized protein
SCNpilot_cont_300_bf_scaffold_2250_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8390..9028)
DNA (639bp) protein (213aa)
LemA family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFN3_BREDI
LemA family protein {ECO:0000313|EMBL:EKY26761.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
LemA family protein; K03744 LemA protein
SCNpilot_cont_300_bf_scaffold_2250_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10900..11892
DNA (993bp) protein (331aa)
Bacterial pre-peptidase C-terminal domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1R5_BREDI
Bacterial pre-peptidase C-terminal domain protein {ECO:0000313|EMBL:EGF94307.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2250_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11955..12941
DNA (987bp) protein (329aa)
Isopentenyl-diphosphate delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00354};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00354};; Isopentenyl diphosphate:dimethylallyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; Type 2 isopentenyl diphosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00354}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulob
isopentenyl-diphosphate delta-isomerase, type 2 (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2]
Isopentenyl-diphosphate delta-isomerase, type 2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1R6_BREDI
SCNpilot_cont_300_bf_scaffold_2250_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12991..13752
DNA (762bp) protein (254aa)
Bacterial pre-peptidase C-terminal domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1R7_BREDI
Bacterial pre-peptidase C-terminal domain protein {ECO:0000313|EMBL:EGF94309.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
peptidase C14 caspase catalytic subunit P20
SCNpilot_cont_300_bf_scaffold_2250_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14341..15870)
DNA (1530bp) protein (510aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3]
Histidine ammonia-lyase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1R9_BREDI
SCNpilot_cont_300_bf_scaffold_2250_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16049..17077)
DNA (1029bp) protein (343aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
urocanate hydratase (EC:4.2.1.49); K01712 urocanate hydratase [EC:4.2.1.49]
Urocanate hydratase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFL3_BREDI
SCNpilot_cont_300_bf_scaffold_2250_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17800..18501
DNA (702bp) protein (234aa)
Histidine utilization repressor n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1S0_BREDI
Histidine utilization repressor {ECO:0000313|EMBL:EGF94312.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
GntR family transcriptional regulator; K05836 GntR family transcriptional regulator, histidine utilization repressor
SCNpilot_cont_300_bf_scaffold_2250_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18507..19397
DNA (891bp) protein (297aa)
Arginase/agmatinase/formiminoglutamase; K01479 formiminoglutamase [EC:3.5.3.8]
Arginase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1S1_BREDI
Arginase family protein {ECO:0000313|EMBL:EGF94313.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Displaying 16 items

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