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SCNpilot_cont_300_bf_scaffold_1354_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1354_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1752)
DNA (1752bp) protein (584aa)
Diguanylate cyclase GGDEF domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUK4_BREDI
Diguanylate cyclase GGDEF domain protein {ECO:0000313|EMBL:EGF96283.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
PAS/PAC sensor(S)-containing diguanylate cyclase/phosphodiesterase
SCNpilot_cont_300_bf_scaffold_1354_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1869..2264)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUK5_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96284.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1354_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2428..3045)
DNA (618bp) protein (206aa)
30S ribosomal protein S4 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUK6_BREDI
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4
SCNpilot_cont_300_bf_scaffold_1354_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3305..4774
DNA (1470bp) protein (490aa)
Amidohydrolase family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRK2_BREDI
Amidohydrolase family protein {ECO:0000313|EMBL:EKY30295.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
amidohydrolase
SCNpilot_cont_300_bf_scaffold_1354_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4782..5738)
DNA (957bp) protein (319aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUK7_BREDI
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:EGF96286.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
beta-lactamase
SCNpilot_cont_300_bf_scaffold_1354_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5796..6410)
DNA (615bp) protein (205aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
superoxide dismutase (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
Superoxide dismutase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUK8_BREDI
SCNpilot_cont_300_bf_scaffold_1354_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6605..6793
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUK9_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96288.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_1354_curated_8
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6809..8956)
DNA (2148bp) protein (716aa)
integral membrane sensor hybrid histidine kinase; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
ATPase n=1 Tax=alpha proteobacterium L41A RepID=UPI000381F71C
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCNpilot_cont_300_bf_scaffold_1354_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8953..10029)
DNA (1077bp) protein (359aa)
Flagellar biosynthetic protein FlhB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUL2_BREDI
Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:EGF96291.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB
SCNpilot_cont_300_bf_scaffold_1354_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10022..10792)
DNA (771bp) protein (257aa)
Flagellar biosynthetic protein fliR n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUL3_BREDI
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
flagellar biosynthetic protein FliR; K02421 flagellar biosynthetic protein FliR
SCNpilot_cont_300_bf_scaffold_1354_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10815..11078)
DNA (264bp) protein (88aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUL4_BREDI
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:EGF96293.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
SCNpilot_cont_300_bf_scaffold_1354_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11271..12266
DNA (996bp) protein (332aa)
OmpA family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUL5_BREDI
OmpA family protein {ECO:0000313|EMBL:EGF96294.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
OmpA/MotB domain-containing protein
SCNpilot_cont_300_bf_scaffold_1354_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12325..12927
DNA (603bp) protein (201aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
folE1; GTP cyclohydrolase 1 (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUL6_BREDI
SCNpilot_cont_300_bf_scaffold_1354_curated_14
unknown

Not on your lists

comp(13235..13372)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1354_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13862..14089
DNA (228bp) protein (76aa)
Acyltransferase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUL7_BREDI
Acyltransferase family protein {ECO:0000313|EMBL:EGF96296.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
acyltransferase
SCNpilot_cont_300_bf_scaffold_1354_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14086..14469)
DNA (384bp) protein (128aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUL8_BREDI
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein {ECO:0000313|EMBL:EGF96297.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1354_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15161..15472)
DNA (312bp) protein (104aa)
Beta-lactamase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUM0_BREDI
Beta-lactamase family protein {ECO:0000313|EMBL:EGF96299.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_1354_curated_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15469..16257)
DNA (789bp) protein (263aa)
Beta-lactamase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUM0_BREDI
Beta-lactamase family protein {ECO:0000313|EMBL:EGF96299.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
penicillin-binding protein, beta-lactamase class C
SCNpilot_cont_300_bf_scaffold_1354_curated_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16353..17096
DNA (744bp) protein (248aa)
Polyphosphate kinase 2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUM1_BREDI
Polyphosphate kinase 2 {ECO:0000313|EMBL:EGF96300.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1354_curated_20
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17125..17889
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZN3_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ70523.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_cont_300_bf_scaffold_1354_curated_21
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17894..18532)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUM2_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96301.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1354_curated_22
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18538..19077)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDP3_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EDX79135.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1354_curated_23
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19101..19691)
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDP3_9CAUL
Acetyltransferase {ECO:0000313|EMBL:KDP93373.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
acetyltransferase
SCNpilot_cont_300_bf_scaffold_1354_curated_24
unknown

Not on your lists

19743..20042
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1354_curated_25
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20052..20465
DNA (414bp) protein (138aa)
LytTr DNA-binding domain family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WDP4_9CAUL
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCNpilot_cont_300_bf_scaffold_1354_curated_26
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20273..20839)
DNA (567bp) protein (189aa)
Transporter, major facilitator family protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QSZ7_BREDI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EKY30677.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
major facilitator transporter
SCNpilot_cont_300_bf_scaffold_1354_curated_27
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21870..22520
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUM5_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96304.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1354_curated_28
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22528..23457)
DNA (930bp) protein (310aa)
Alpha/beta hydrolase fold family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUM6_BREDI
Alpha/beta hydrolase fold family protein {ECO:0000313|EMBL:EGF96305.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
alpha/beta hydrolase
SCNpilot_cont_300_bf_scaffold_1354_curated_29
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23583..23780)
DNA (198bp) protein (66aa)
Helix-turn-helix family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUM7_BREDI
Helix-turn-helix family protein {ECO:0000313|EMBL:EGF96306.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
XRE family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1354_curated_30
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23780..24187)
DNA (408bp) protein (136aa)
Putative membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QUM8_BREDI
Putative membrane protein {ECO:0000313|EMBL:EGF96307.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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