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SCNpilot_cont_300_bf_scaffold_3103_curated

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3103_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..203)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB7_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96546.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(251..973)
DNA (723bp) protein (241aa)
Ribonuclease n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB6_BREDI
Ribonuclease {ECO:0000313|EMBL:EGF96545.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ribonuclease T2
SCNpilot_cont_300_bf_scaffold_3103_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1067..1351
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB5_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96544.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3103_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1406..2752)
DNA (1347bp) protein (449aa)
Tat twin-arginine translocation pathway signal sequence domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB4_BREDI
Tat twin-arginine translocation pathway signal sequence domain protein {ECO:0000313|EMBL:EGF96543.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
oxidoreductase, Gfo/Idh/MocA family protein
SCNpilot_cont_300_bf_scaffold_3103_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2822..3484)
DNA (663bp) protein (221aa)
aspartate racemase; K01779 aspartate racemase [EC:5.1.1.13]
Aspartate racemase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB3_BREDI
Aspartate racemase {ECO:0000313|EMBL:EGF96542.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3103_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3709..4161)
DNA (453bp) protein (151aa)
Acetyltransferase GNAT family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB2_BREDI
Acetyltransferase GNAT family protein {ECO:0000313|EMBL:EGF96541.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Acetyltransferase, gnat family protein
SCNpilot_cont_300_bf_scaffold_3103_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4397..6304
DNA (1908bp) protein (636aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Phosphomethylpyrimidine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVB0_BREDI
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC
SCNpilot_cont_300_bf_scaffold_3103_curated_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6438..7103
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Klebsiella pneumoniae MGH 40 RepID=V3LJK3_KLEPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EER61521.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SCNpilot_cont_300_bf_scaffold_3103_curated_9
Streptomyces coelicoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7459..7965
DNA (507bp) protein (169aa)
Uncharacterized protein (Fragment) n=1 Tax=Streptomyces coelicoflavus ZG0656 RepID=H1QE89_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EHN77256.1}; Flags: Fragment;; TaxID=1120227 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces coelicoflavus ZG0656.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_curated_10
unknown

Not on your lists

7962..8144
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3103_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8394..9221
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLB3_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY28779.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9332..10003)
DNA (672bp) protein (224aa)
DsbA-like protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLC3_BREDI
DsbA-like protein {ECO:0000313|EMBL:EKY28778.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
DSBA oxidoreductase
SCNpilot_cont_300_bf_scaffold_3103_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10115..11050
DNA (936bp) protein (312aa)
inosine/uridine-preferring nucleoside hydrolase; K01239 purine nucleosidase [EC:3.2.2.1]
Putative cytidine/uridine-specific hydrolase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQT7_BREDI
Putative cytidine/uridine-specific hydrolase {ECO:0000313|EMBL:EKY30065.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_3103_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11047..11892
DNA (846bp) protein (282aa)
PfkB domain-containing protein; K00852 ribokinase [EC:2.7.1.15]
Putative ribokinase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQ66_BREDI
Putative ribokinase {ECO:0000313|EMBL:EKY30066.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_3103_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11903..12934)
DNA (1032bp) protein (344aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPY6_BREDI
SCNpilot_cont_300_bf_scaffold_3103_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13104..13502)
DNA (399bp) protein (133aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Holliday junction DNA helicase RuvA; K03550 holliday junction DNA helicase RuvA [EC:3.6.4.12]
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPZ0_BREDI
SCNpilot_cont_300_bf_scaffold_3103_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13663..14175)
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA9_BREDI
SCNpilot_cont_300_bf_scaffold_3103_curated_18
unknown

Not on your lists

14471..14722
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3103_curated_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15664..16182)
DNA (519bp) protein (173aa)
Cation-binding protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA6_BREDI
Cation-binding protein {ECO:0000313|EMBL:EGF96535.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_curated_20
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16772..17011
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W2A0_MAGSA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE52025.1}; TaxID=342108 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
SCNpilot_cont_300_bf_scaffold_3103_curated_21
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16996..17316
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA4_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96533.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_curated_22
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17406..17762
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA3_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96532.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3103_curated_23
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17767..18231
DNA (465bp) protein (155aa)
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:EGF96531.1}; EC=3.1.2.- {ECO:0000313|EMBL:EGF96531.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
tol-pal system-associated acyl-CoA thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA2_BREDI
SCNpilot_cont_300_bf_scaffold_3103_curated_24
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18355..19104
DNA (750bp) protein (250aa)
Protein TolQ n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA1_BREDI
Protein TolQ {ECO:0000313|EMBL:EGF96530.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
protein TolQ; K03562 biopolymer transport protein TolQ
SCNpilot_cont_300_bf_scaffold_3103_curated_25
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19108..19572
DNA (465bp) protein (155aa)
Protein TolR n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPZ3_BREDI
Protein TolR {ECO:0000313|EMBL:EKY30078.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
protein TolR; K03560 biopolymer transport protein TolR
SCNpilot_cont_300_bf_scaffold_3103_curated_26
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19579..19938
DNA (360bp) protein (120aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W8E0_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EDX80948.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3103_curated_27
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20123..20386
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QPZ2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30079.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_3103_curated_28
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20505..21887
DNA (1383bp) protein (461aa)
Protein TolB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QVA0_BREDI
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Tol-Pal system beta propeller repeat protein TolB; K03641 TolB protein
SCNpilot_cont_300_bf_scaffold_3103_curated_29
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22040..22594
DNA (555bp) protein (185aa)
Peptidoglycan-associated lipoprotein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV99_BREDI
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:EGF96528.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
peptidoglycan-associated lipoprotein; K03640 peptidoglycan-associated lipoprotein
SCNpilot_cont_300_bf_scaffold_3103_curated_30
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22704..23852
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QV98_BREDI
Putative uncharacterized protein {ECO:0000313|EMBL:EGF96527.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
Displaying items 1-30 of 31 in total

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