ggKbase home page

SCNpilot_cont_300_bf_scaffold_5236_curated

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5236_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..433
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGI0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY26775.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5236_curated_2
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(507..1241)
DNA (735bp) protein (245aa)
hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
Hemolysin A n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W6Q1_9CAUL
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCNpilot_cont_300_bf_scaffold_5236_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1238..1924)
DNA (687bp) protein (229aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFL9_BREDI
Suspect SCG annotation. See neighboring gene [SCNpilot_cont_300_bf_scaffold_5236_curated_4].
SCNpilot_cont_300_bf_scaffold_5236_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1876..3957)
DNA (2082bp) protein (694aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9]
Valine--tRNA ligase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1S5_BREDI
SCNpilot_cont_300_bf_scaffold_5236_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4089..5882)
DNA (1794bp) protein (598aa)
Type II restriction enzyme methylase-like protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1S4_BREDI
Type II restriction enzyme methylase-like protein {ECO:0000313|EMBL:EGF94316.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5236_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5909..6604)
DNA (696bp) protein (232aa)
Type II restriction enzyme methylase-like protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1S4_BREDI
Type II restriction enzyme methylase-like protein {ECO:0000313|EMBL:EGF94316.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
Displaying 6 items

View Taxonomy