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SCNpilot_cont_300_bf_scaffold_3836_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3836_curated_1
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..562
DNA (561bp) protein (187aa)
Phage integrase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HXQ4_AZOC5
phage integrase
Phage integrase {ECO:0000313|EMBL:BAF87525.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_3836_curated_2
unknown

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559..657
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3836_curated_3
unknown

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723..899
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3836_curated_4
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(1430..2143)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0S8P6_ACIJO
hypothetical protein
Tax=RBG_13_Planctomycetes_60_9_curated
SCNpilot_cont_300_bf_scaffold_3836_curated_5
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2640..3194
DNA (555bp) protein (185aa)
Resolvase domain protein n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2R0_SPHCR
Uncharacterized protein {ECO:0000313|EMBL:KDP94915.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
resolvase domain-containing protein
SCNpilot_cont_300_bf_scaffold_3836_curated_6
unknown

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3309..3653
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3836_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3919..4614)
DNA (696bp) protein (232aa)
uroporphyrinogen III synthase HEM4; K01719 uroporphyrinogen-III synthase [EC:4.2.1.75]
Uroporphyrinogen-III synthase domain protein (Fragment) n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGD4_BREDI
Uroporphyrinogen-III synthase domain protein {ECO:0000313|EMBL:EKY27069.1}; Flags: Fragment;; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_3836_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4619..4846)
DNA (228bp) protein (76aa)
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
Hydroxymethylbilane synthase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGH3_BREDI
SCNpilot_cont_300_bf_scaffold_3836_curated_9
unknown

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5141..5545
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3836_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6011..6628
DNA (618bp) protein (206aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphapr
metalloendopeptidase, glycoprotease family (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57]
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHK1_BREDI
SCNpilot_cont_300_bf_scaffold_3836_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6670..7668
DNA (999bp) protein (333aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0E2_BREDI
SCNpilot_cont_300_bf_scaffold_3836_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7668..8057
DNA (390bp) protein (130aa)
Rieske 2Fe-2S domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0E3_BREDI
Rieske 2Fe-2S domain protein {ECO:0000313|EMBL:EGF96078.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Rieske (2Fe-2S) iron-sulfur domain-containing protein
SCNpilot_cont_300_bf_scaffold_3836_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8146..8304)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0E4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96079.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3836_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8377..8850)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0E5_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96080.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
phasin
SCNpilot_cont_300_bf_scaffold_3836_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8871..9650)
DNA (780bp) protein (260aa)
Creatinine amidohydrolase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0E6_BREDI
Creatinine amidohydrolase family protein {ECO:0000313|EMBL:EGF96081.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
creatininase
SCNpilot_cont_300_bf_scaffold_3836_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9737..10336)
DNA (600bp) protein (200aa)
Bacterial regulatory protein, tetR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0E7_BREDI
Bacterial regulatory protein, tetR family protein {ECO:0000313|EMBL:EGF96082.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_3836_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10336..11640)
DNA (1305bp) protein (435aa)
Drug resistance MFS transporter n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0E8_BREDI
Drug resistance MFS transporter {ECO:0000313|EMBL:EGF96083.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
EmrB/QacA subfamily drug resistance transporter
Displaying 17 items

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