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SCNpilot_cont_300_bf_scaffold_7063_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_7063_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..773)
DNA (771bp) protein (257aa)
YceI-like domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZL1_BREDI
YceI-like domain protein {ECO:0000313|EMBL:EGF94835.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_7063_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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810..2771
DNA (1962bp) protein (654aa)
DNA mismatch repair protein MutL n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZL2_BREDI
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL
SCNpilot_cont_300_bf_scaffold_7063_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2808..3278
DNA (471bp) protein (157aa)
protein tyrosine phosphatase; K01104 protein-tyrosine phosphatase [EC:3.1.3.48]
Low molecular weight phosphotyrosine protein phosphatase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZL3_BREDI
Low molecular weight phosphotyrosine protein phosphatase family protein {ECO:0000313|EMBL:EGF94837.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_7063_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3462..3737
DNA (276bp) protein (92aa)
UPF0386 protein BDIM_16660 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZL4_BREDI
UPF0386 protein BDIM_16660 {ECO:0000256|HAMAP-Rule:MF_00827}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K09982 hypothetical protein
SCNpilot_cont_300_bf_scaffold_7063_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3720..3878)
DNA (159bp) protein (53aa)
methyltransferase; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
RNA methyltransferase, RsmD family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNL2_BREDI
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EKY29157.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_7063_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4313..5437
DNA (1125bp) protein (375aa)
CAAX amino terminal protease family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZL6_BREDI
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EGF94840.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_7063_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5639..6691)
DNA (1053bp) protein (351aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Pseudouridine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZL8_BREDI
SCNpilot_cont_300_bf_scaffold_7063_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7542..7955
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZM0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94844.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_7063_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7952..8539)
DNA (588bp) protein (196aa)
Acetyltransferase GNAT family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZM1_BREDI
Acetyltransferase GNAT family protein {ECO:0000313|EMBL:EGF94845.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
N-acetyltransferase GCN5
SCNpilot_cont_300_bf_scaffold_7063_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8536..9480)
DNA (945bp) protein (315aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
3-dehydroquinate synthase (EC:4.2.3.4); K01735 3-dehydroquinate synthase [EC:4.2.3.4]
3-dehydroquinate synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZM2_BREDI
SCNpilot_cont_300_bf_scaffold_7063_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9639..10208)
DNA (570bp) protein (190aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZM3_BREDI
SCNpilot_cont_300_bf_scaffold_7063_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10277..10561
DNA (285bp) protein (95aa)
Tyrosine recombinase XerD n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZM4_BREDI
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
integrase; K04763 integrase/recombinase XerD
Displaying 12 items

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