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SCNpilot_cont_300_bf_scaffold_4874_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4874_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..758)
DNA (756bp) protein (252aa)
Phosphate transporter family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1G5_BREDI
Phosphate transporter family protein {ECO:0000313|EMBL:EGF95037.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
pit; phosphate transport transmembrane protein; K03306 inorganic phosphate transporter, PiT family
SCNpilot_cont_300_bf_scaffold_4874_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(765..1421)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1G6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95038.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K07220 hypothetical protein
SCNpilot_cont_300_bf_scaffold_4874_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1612..2775
DNA (1164bp) protein (388aa)
Aspartyl/Asparaginyl beta-hydroxylase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1G7_BREDI
Aspartyl/Asparaginyl beta-hydroxylase family protein {ECO:0000313|EMBL:EGF95039.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
aspartyl/asparaginyl beta-hydroxylase
SCNpilot_cont_300_bf_scaffold_4874_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2869..3558)
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1G8_BREDI
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1
SCNpilot_cont_300_bf_scaffold_4874_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3562..3993)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1G9_BREDI
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11
SCNpilot_cont_300_bf_scaffold_4874_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4191..5060)
DNA (870bp) protein (290aa)
Transcription termination/antitermination protein NusG n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1H0_BREDI
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
NusG antitermination factor; K02601 transcriptional antiterminator NusG
SCNpilot_cont_300_bf_scaffold_4874_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5306..5836)
DNA (531bp) protein (177aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1H2_BREDI
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EGF95044.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
SCNpilot_cont_300_bf_scaffold_4874_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5939..6364
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD79_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY25933.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_4874_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6424..6987
DNA (564bp) protein (188aa)
Nitrogen fixation regulation protein fixK n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1H4_BREDI
Nitrogen fixation regulation protein fixK {ECO:0000313|EMBL:EGF95046.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
anr; Transcriptional activator protein Anr; K01420 CRP/FNR family transcriptional regulator, anaerobic regulatory protein
SCNpilot_cont_300_bf_scaffold_4874_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6945..7148
DNA (204bp) protein (68aa)
Nitrogen fixation regulation protein fixK n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1H4_BREDI
Nitrogen fixation regulation protein fixK {ECO:0000313|EMBL:EGF95046.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Crp/Fnr family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_4874_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7214..7930)
DNA (717bp) protein (239aa)
Outer membrane protein W n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1H5_BREDI
Outer membrane protein W {ECO:0000313|EMBL:EGF95047.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
OmpW family protein; K07275 outer membrane protein
SCNpilot_cont_300_bf_scaffold_4874_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8058..8177)
DNA (120bp) protein (40aa)
Cyd operon protein YbgT n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD81_BREDI
Cyd operon protein YbgT {ECO:0000313|EMBL:EKY25929.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
cyd operon protein YbgT
SCNpilot_cont_300_bf_scaffold_4874_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8200..9348)
DNA (1149bp) protein (383aa)
cydB; cytochrome bd-type quinol oxidase subunit 2 CydB (EC:1.10.3.-); K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
Cytochrome d ubiquinol oxidase, subunit II n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QD74_BREDI
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:EKY25928.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_4874_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9375..10943)
DNA (1569bp) protein (523aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome D ubiquinol oxidase, subunit I n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QEA8_BREDI
Cytochrome D ubiquinol oxidase, subunit I {ECO:0000313|EMBL:EKY25927.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_4874_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11182..12762
DNA (1581bp) protein (527aa)
ATP-binding/permease protein cydD n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1H9_BREDI
ATP-binding/permease protein cydD {ECO:0000313|EMBL:EGF95051.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
cysteine ABC transporter permease/ATP-binding protein; K16013 ATP-binding cassette, subfamily C, bacterial CydD
SCNpilot_cont_300_bf_scaffold_4874_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12759..14393
DNA (1635bp) protein (545aa)
Thiol reductant ABC exporter, CydC subunit n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QE21_BREDI
Thiol reductant ABC exporter, CydC subunit {ECO:0000313|EMBL:EKY25925.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
cysteine ABC transporter permease/ATP-binding protein CydC; K16012 ATP-binding cassette, subfamily C, bacterial CydC
SCNpilot_cont_300_bf_scaffold_4874_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14468..14584
DNA (117bp) protein (39aa)
Putative membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1I0_BREDI
Putative membrane protein {ECO:0000313|EMBL:EGF95052.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_4874_curated_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14587..14958
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1I1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95053.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4874_curated_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14984..15535)
DNA (552bp) protein (184aa)
Transporter associated domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1I2_BREDI
Transporter associated domain protein {ECO:0000313|EMBL:EGF95054.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K03699 putative hemolysin
Displaying 19 items

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