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SCNpilot_cont_300_bf_scaffold_2992_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2992_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..465)
DNA (465bp) protein (155aa)
Peptidase family S41 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0T9_BREDI
Peptidase family S41 family protein {ECO:0000313|EMBL:EGF94962.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2992_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1304..1759
DNA (456bp) protein (152aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
3-dehydroquinate dehydratase (EC:4.2.1.10); K03786 3-dehydroquinate dehydratase II [EC:4.2.1.10]
3-dehydroquinate dehydratase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U0_BREDI
SCNpilot_cont_300_bf_scaffold_2992_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1800..2288
DNA (489bp) protein (163aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U1_BREDI
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EGF94964.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
SCNpilot_cont_300_bf_scaffold_2992_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2294..3646
DNA (1353bp) protein (451aa)
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:EGF94965.1}; EC=6.4.1.2 {ECO:0000313|EMBL:EGF94965.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
acetyl-CoA carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U2_BREDI
SCNpilot_cont_300_bf_scaffold_2992_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3657..4352
DNA (696bp) protein (232aa)
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088489}; EC=2.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00688, ECO:0000256|SAAS:SAAS00088482};; L/F-transferase {ECO:0000256|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000256|HAMAP-Rule:MF_00688}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 115
leucyl/phenylalanyl-tRNA/protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6]
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U3_BREDI
SCNpilot_cont_300_bf_scaffold_2992_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4319..5017)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94967.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2992_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5014..5502)
DNA (489bp) protein (163aa)
NADH:ubiquinone oxidoreductase 17.2 kD subunit; K00356 NADH dehydrogenase [EC:1.6.99.3]
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U5_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94968.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2992_curated_8
Sporothrix schenckii, Sporothrix, Ophiostomatales, Sordariomycetidae, Ascomycota, Fungi

Not on your lists

comp(5481..6194)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI00034CE6F8
Uncharacterized protein {ECO:0000313|EMBL:ERS98377.1}; TaxID=1391915 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; mitosporic Ophiostomataceae; Sporothrix.;" source="Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183); (Rose-picker's disease fungus).;"
SCNpilot_cont_300_bf_scaffold_2992_curated_9
unknown

Not on your lists

comp(6207..6551)
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2992_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7616..8131
DNA (516bp) protein (172aa)
ribonucleotide reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
B12-dependent ribonucleoside diphosphate reductase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U7_BREDI
B12-dependent ribonucleoside diphosphate reductase {ECO:0000313|EMBL:EGF94970.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2992_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8203..8697
DNA (495bp) protein (165aa)
Pentapeptide repeat 8 copies family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0U8_BREDI
Pentapeptide repeat 8 copies family protein {ECO:0000313|EMBL:EGF94971.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
pentapeptide repeat protein
SCNpilot_cont_300_bf_scaffold_2992_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8763..9671
DNA (909bp) protein (303aa)
Pentapeptide repeat protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLJ4_BREDI
Pentapeptide repeat protein {ECO:0000313|EMBL:EKY28854.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
pentapeptide repeat protein
SCNpilot_cont_300_bf_scaffold_2992_curated_13
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10132..11577
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=Burkholderia thailandensis RepID=UPI00016AFCBE
hypothetical protein
Tax=GWF1_Sphingomonadales_63_6_curated
SCNpilot_cont_300_bf_scaffold_2992_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11736..12395
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QLP9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY28851.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
DnaA-like protein
SCNpilot_cont_300_bf_scaffold_2992_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12526..14715
DNA (2190bp) protein (730aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
polyphosphate kinase (EC:2.7.4.1); K00937 polyphosphate kinase [EC:2.7.4.1]
Polyphosphate kinase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMD3_BREDI
SCNpilot_cont_300_bf_scaffold_2992_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14715..16205
DNA (1491bp) protein (497aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
Ppx/GppA phosphatase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0V1_BREDI
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:EGF94974.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2992_curated_17
RIFOXYB1_FULL_Caulobacterales_67_16_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16218..16583
DNA (366bp) protein (122aa)
Glyoxalase family protein n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QJG3_BRESC
glyoxalase family protein
Tax=RIFOXYB1_FULL_Caulobacterales_67_16_curated
SCNpilot_cont_300_bf_scaffold_2992_curated_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16590..17744)
DNA (1155bp) protein (385aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ribonuclease D (EC:3.1.13.5); K03684 ribonuclease D [EC:3.1.13.5]
Ribonuclease D n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0V2_BREDI
SCNpilot_cont_300_bf_scaffold_2992_curated_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17826..18863
DNA (1038bp) protein (346aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QMS1_BREDI
SCNpilot_cont_300_bf_scaffold_2992_curated_20
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19108..19326)
DNA (219bp) protein (73aa)
Serine carboxypeptidase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0V3_BREDI
Serine carboxypeptidase family protein {ECO:0000313|EMBL:EGF94976.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
peptidase S10 serine carboxypeptidase
SCNpilot_cont_300_bf_scaffold_2992_curated_21
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19427..20065)
DNA (639bp) protein (213aa)
Serine carboxypeptidase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0V3_BREDI
Serine carboxypeptidase family protein {ECO:0000313|EMBL:EGF94976.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
peptidase S10 serine carboxypeptidase
SCNpilot_cont_300_bf_scaffold_2992_curated_22
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20881..21255
DNA (375bp) protein (125aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0V4_BREDI
Displaying 22 items

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