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SCNpilot_cont_300_bf_scaffold_5544_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5544_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..394)
DNA (393bp) protein (131aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EGF96050.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EGF96050.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7]
DNA polymerase III, delta subunit n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0B5_BREDI
SCNpilot_cont_300_bf_scaffold_5544_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(405..890)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0B6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96051.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K03643 LPS-assembly lipoprotein
SCNpilot_cont_300_bf_scaffold_5544_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(890..3469)
DNA (2580bp) protein (860aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
leucyl-tRNA synthetase; K01869 leucyl-tRNA synthetase [EC:6.1.1.4]
Leucine--tRNA ligase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QQX5_BREDI
SCNpilot_cont_300_bf_scaffold_5544_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3557..4006)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0B7_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96052.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5544_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4355..4756
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR95_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30426.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5544_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4771..5238)
DNA (468bp) protein (156aa)
thiamine monophosphate synthase; K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine monophosphate synthase/TENI n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QR02_BREDI
Thiamine monophosphate synthase/TENI {ECO:0000313|EMBL:EKY30424.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_5544_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5480..6079
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0B8_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96053.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
alanine racemase; K06997
SCNpilot_cont_300_bf_scaffold_5544_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6142..6972
DNA (831bp) protein (277aa)
Response regulator n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0B9_BREDI
Response regulator {ECO:0000313|EMBL:EGF96054.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_5544_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6938..7738
DNA (801bp) protein (267aa)
Glycine cleavage system transcriptional activator n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0C0_BREDI
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:EGF96055.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
gcvA; LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_5544_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7816..7938
DNA (123bp) protein (41aa)
Putative membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0C1_BREDI
Putative membrane protein {ECO:0000313|EMBL:EGF96056.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_5544_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7946..8224)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0C2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96057.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5544_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8521..8793)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRW0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30420.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_5544_curated_13
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8882..9892
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=alpha proteobacterium L41A RepID=UPI00037CBAC0
Carboxylate transporter {ECO:0000313|EMBL:KDP93760.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
citrate transporter
Displaying 13 items

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