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SCNpilot_cont_300_bf_scaffold_5209_curated

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5209_curated_1
unknown

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3..77
DNA (75bp) protein (25aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5209_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(230..394)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZA7_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF93989.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5209_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

544..1701
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRH2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY30152.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5209_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1715..2644
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZA8_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF93990.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
transcription factor jumonji JmjC domain-containing protein
SCNpilot_cont_300_bf_scaffold_5209_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2746..3843
DNA (1098bp) protein (366aa)
PE-PGRS family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZA9_BREDI
PE-PGRS family protein {ECO:0000313|EMBL:EGF93991.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5209_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3734..4492)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZB0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF93992.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_5209_curated_7
Brevundimonas subvibrioides, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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5079..5384
DNA (306bp) protein (102aa)
30S ribosomal protein S10 n=4 Tax=Brevundimonas RepID=D9QGK1_BRESC
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;"
SCNpilot_cont_300_bf_scaffold_5209_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5408..6151
DNA (744bp) protein (248aa)
50S ribosomal protein L3 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZB2_BREDI
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3
SCNpilot_cont_300_bf_scaffold_5209_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6151..6789
DNA (639bp) protein (213aa)
50S ribosomal protein L4 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZB3_BREDI
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L4/L1e; K02926 large subunit ribosomal protein L4
SCNpilot_cont_300_bf_scaffold_5209_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6789..7094
DNA (306bp) protein (102aa)
50S ribosomal protein L23 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZB4_BREDI
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23
SCNpilot_cont_300_bf_scaffold_5209_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7099..7920
DNA (822bp) protein (274aa)
50S ribosomal protein L2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZB5_BREDI
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
SCNpilot_cont_300_bf_scaffold_5209_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7923..8201
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=2 Tax=Brevundimonas diminuta RepID=F4QZB6_BREDI
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
rpsS; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
SCNpilot_cont_300_bf_scaffold_5209_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8255..8542
DNA (288bp) protein (96aa)
50S ribosomal protein L22 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZB7_BREDI
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
SCNpilot_cont_300_bf_scaffold_5209_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8542..9288
DNA (747bp) protein (249aa)
30S ribosomal protein S3 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZB8_BREDI
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
SCNpilot_cont_300_bf_scaffold_5209_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9295..9732
DNA (438bp) protein (146aa)
50S ribosomal protein L16 n=2 Tax=Brevundimonas diminuta RepID=F4QZB9_BREDI
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
SCNpilot_cont_300_bf_scaffold_5209_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9732..9929
DNA (198bp) protein (66aa)
50S ribosomal protein L29 n=2 Tax=Brevundimonas diminuta RepID=F4QZC0_BREDI
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
SCNpilot_cont_300_bf_scaffold_5209_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9940..10182
DNA (243bp) protein (81aa)
30S ribosomal protein S17 n=2 Tax=Brevundimonas diminuta RepID=F4QZC1_BREDI
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
SCNpilot_cont_300_bf_scaffold_5209_curated_18
Brevundimonas sp. KM4, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10201..10569
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=3 Tax=Brevundimonas RepID=B4W9V9_9CAUL
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;"
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
SCNpilot_cont_300_bf_scaffold_5209_curated_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10572..10880
DNA (309bp) protein (103aa)
50S ribosomal protein L24 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZC3_BREDI
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
SCNpilot_cont_300_bf_scaffold_5209_curated_20
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


10880..11437
DNA (558bp) protein (186aa)
50S ribosomal protein L5 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZC4_BREDI
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5
SCNpilot_cont_300_bf_scaffold_5209_curated_21
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11457..11762
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZC5_BREDI
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
SCNpilot_cont_300_bf_scaffold_5209_curated_22
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11778..12176
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=2 Tax=Bacteria RepID=L1QQ44_BREDI
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8
SCNpilot_cont_300_bf_scaffold_5209_curated_23
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12178..12711
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRF2_BREDI
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
SCNpilot_cont_300_bf_scaffold_5209_curated_24
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12715..12912
DNA (198bp) protein (66aa)
50S ribosomal protein L18 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZC6_BREDI
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
50S ribosomal protein L18; K02881 large subunit ribosomal protein L18
Displaying 24 items

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