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SCNpilot_cont_300_bf_scaffold_1933_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1933_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..267
DNA (267bp) protein (89aa)
Ribosomal protein L32 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2M2_BREDI
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ribosomal protein l32; K02911 large subunit ribosomal protein L32
SCNpilot_cont_300_bf_scaffold_1933_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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434..1393
DNA (960bp) protein (320aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Enolase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2M3_BREDI
SCNpilot_cont_300_bf_scaffold_1933_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1444..1665
DNA (222bp) protein (74aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
Enolase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9F4_BREDI
SCNpilot_cont_300_bf_scaffold_1933_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1807..2139
DNA (333bp) protein (111aa)
Septum formation initiator family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2M4_BREDI
Septum formation initiator family protein {ECO:0000313|EMBL:EGF94469.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
septum formation initiator
SCNpilot_cont_300_bf_scaffold_1933_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2253..3281
DNA (1029bp) protein (343aa)
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}; EC=1.2.4.1 {ECO:0000256|RuleBase:RU361139};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase acetyl-transferring E1 component, alpha subunit n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2M5_BREDI
SCNpilot_cont_300_bf_scaffold_1933_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3285..4634
DNA (1350bp) protein (450aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q947_BREDI
Pyruvate dehydrogenase E1 component subunit beta {ECO:0000313|EMBL:EKY24250.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_1933_curated_7
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4631..4936
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8J7_BREDI
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
SCNpilot_cont_300_bf_scaffold_1933_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4933..6204
DNA (1272bp) protein (424aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q9F9_BREDI
SCNpilot_cont_300_bf_scaffold_1933_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6220..6699
DNA (480bp) protein (160aa)
peroxiredoxin (EC:1.11.1.15); K00432 glutathione peroxidase [EC:1.11.1.9]
Glutathione peroxidase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2M6_BREDI
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_1933_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6702..8108
DNA (1407bp) protein (469aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4]
Dihydrolipoyl dehydrogenase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8G3_BREDI
SCNpilot_cont_300_bf_scaffold_1933_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8174..9178
DNA (1005bp) protein (335aa)
Cysteine synthase {ECO:0000313|EMBL:EGF94473.1}; EC=2.5.1.47 {ECO:0000313|EMBL:EGF94473.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
pyridoxal-5'-phosphate-dependent protein subunit beta; K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2M8_BREDI
SCNpilot_cont_300_bf_scaffold_1933_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9175..10128
DNA (954bp) protein (318aa)
Glycine cleavage system transcriptional activator n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2M9_BREDI
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:EGF94474.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
LysR family transcriptional regulator; K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator
SCNpilot_cont_300_bf_scaffold_1933_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10231..10764
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2N0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94475.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1933_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10887..11576)
DNA (690bp) protein (230aa)
Metallo-beta-lactamase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2N1_BREDI
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:EGF94476.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K06167 PhnP protein
SCNpilot_cont_300_bf_scaffold_1933_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11573..12358)
DNA (786bp) protein (262aa)
hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-]
Hydrolase, TatD family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2N2_BREDI
Hydrolase, TatD family protein {ECO:0000313|EMBL:EGF94477.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_1933_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12360..13340)
DNA (981bp) protein (327aa)
DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EGF94478.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EGF94478.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7]
DNA polymerase III, delta' subunit n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2N3_BREDI
SCNpilot_cont_300_bf_scaffold_1933_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13337..13963)
DNA (627bp) protein (209aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9]
Thymidylate kinase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2N4_BREDI
SCNpilot_cont_300_bf_scaffold_1933_curated_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14004..14891)
DNA (888bp) protein (296aa)
Rare lipoprotein A family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2N5_BREDI
Rare lipoprotein A family protein {ECO:0000313|EMBL:EGF94480.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
lipoprotein A; K03642 rare lipoprotein A
SCNpilot_cont_300_bf_scaffold_1933_curated_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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15025..15963
DNA (939bp) protein (313aa)
Putative amino-acid metabolite efflux pump n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R2N6_BREDI
Putative amino-acid metabolite efflux pump {ECO:0000313|EMBL:EGF94481.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
Displaying 19 items

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