ggKbase home page

SCNpilot_cont_300_bf_scaffold_5268_curated

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5268_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..523)
DNA (522bp) protein (174aa)
Type I secretion outer membrane protein, TolC family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYT9_BREDI
Type I secretion outer membrane protein, TolC family protein {ECO:0000313|EMBL:EGF94710.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
type I secretion outer membrane protein, TolC; K12340 outer membrane channel protein
SCNpilot_cont_300_bf_scaffold_5268_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(661..1110)
DNA (450bp) protein (150aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase; K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYU0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94711.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_5268_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1485..2294)
DNA (810bp) protein (270aa)
tRNA/rRNA methyltransferase SpoU; K00599 [EC:2.1.1.-]
SpoU rRNA Methylase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYU1_BREDI
SpoU rRNA Methylase family protein {ECO:0000313|EMBL:EGF94712.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_5268_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2466..3962)
DNA (1497bp) protein (499aa)
Resolvase-like protein n=2 Tax=Brevundimonas diminuta RepID=F4QYU2_BREDI
Resolvase-like protein {ECO:0000313|EMBL:EGF94713.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
resolvase
SCNpilot_cont_300_bf_scaffold_5268_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4481..4819)
DNA (339bp) protein (113aa)
Uncharacterized protein n=2 Tax=Brevundimonas diminuta RepID=F4QYU4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94715.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5268_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4821..5036)
DNA (216bp) protein (72aa)
Uncharacterized protein n=2 Tax=Brevundimonas diminuta RepID=F4QYU5_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94716.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_5268_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5050..5826)
DNA (777bp) protein (259aa)
Bacterial conjugation TrbI-like protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8A9_BREDI
Conjugal transfer protein trbI {ECO:0000313|EMBL:EGF94717.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Displaying 7 items

View Taxonomy