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SCNpilot_cont_300_bf_scaffold_4522_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4522_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1325)
DNA (1323bp) protein (441aa)
Tetratricopeptide repeat protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QRM0_BREDI
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EKY30654.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
endoglucanase H
SCNpilot_cont_300_bf_scaffold_4522_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1686..1877
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWQ0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95454.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4522_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1905..3221)
DNA (1317bp) protein (439aa)
Amidohydrolase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWQ1_BREDI
Amidohydrolase family protein {ECO:0000313|EMBL:EGF95455.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
amidohydrolase
SCNpilot_cont_300_bf_scaffold_4522_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3348..4046
DNA (699bp) protein (233aa)
Twin-arginine translocation pathway signal n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWQ2_BREDI
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EGF95456.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4522_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4063..5340)
DNA (1278bp) protein (426aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
phosphoribosylamine/glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWQ3_BREDI
SCNpilot_cont_300_bf_scaffold_4522_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5413..5832)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNI9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY29548.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_4522_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5848..6027)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QNH1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY29549.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_4522_curated_8
Brevundimonas nasdae, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6119..7654
DNA (1536bp) protein (512aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=172043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas nasdae.;"
exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Exodeoxyribonuclease 7 large subunit n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WAJ1_9CAUL
SCNpilot_cont_300_bf_scaffold_4522_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7814..8989)
DNA (1176bp) protein (392aa)
D-aminopeptidase {ECO:0000313|EMBL:EGF95459.1}; EC=3.4.11.19 {ECO:0000313|EMBL:EGF95459.1};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
peptidase S58 DmpA; K01266 D-aminopeptidase [EC:3.4.11.19]
D-aminopeptidase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWQ5_BREDI
SCNpilot_cont_300_bf_scaffold_4522_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9075..9284
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWQ6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95460.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4522_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9344..9841
DNA (498bp) protein (166aa)
Chemotaxis protein cheY n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWQ7_BREDI
Chemotaxis protein cheY {ECO:0000313|EMBL:EGF95461.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
response regulator receiver protein
SCNpilot_cont_300_bf_scaffold_4522_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9838..10740)
DNA (903bp) protein (301aa)
lipid A biosynthesis acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
Bacterial lipid A biosynthesis acyltransferase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWQ8_BREDI
Bacterial lipid A biosynthesis acyltransferase family protein {ECO:0000313|EMBL:EGF95462.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_4522_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10787..11326)
DNA (540bp) protein (180aa)
Short chain dehydrogenase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWQ9_BREDI
Short chain dehydrogenase family protein {ECO:0000313|EMBL:EGF95463.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_4522_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13163..13702
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWR1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF95465.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K09990 hypothetical protein
SCNpilot_cont_300_bf_scaffold_4522_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13917..14933)
DNA (1017bp) protein (339aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
Isoleucine--tRNA ligase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QWR2_BREDI
Displaying 15 items

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