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SCNpilot_cont_300_bf_scaffold_2513_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2513_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..559)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGN1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY27174.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
putative transposase
SCNpilot_cont_300_bf_scaffold_2513_curated_2
unknown

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731..988
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2513_curated_3
unknown

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comp(1682..1900)
DNA (219bp) protein (73aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2513_curated_4
unknown

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comp(1922..2047)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2513_curated_5
Brevundimonas abyssalis, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2454..3914
DNA (1461bp) protein (487aa)
Recombinase n=1 Tax=Brevundimonas abyssalis TAR-001 RepID=U2YYC6_9CAUL
Recombinase {ECO:0000313|EMBL:GAD60521.1}; TaxID=1391729 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas abyssalis TAR-001.;"
recombinase
SCNpilot_cont_300_bf_scaffold_2513_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4010..4450)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGS9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY27183.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2513_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4485..5438)
DNA (954bp) protein (318aa)
Magnesium chelatase, subunit ChlI family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZR8_BREDI
Magnesium chelatase, subunit ChlI family protein {ECO:0000313|EMBL:EGF96005.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein
SCNpilot_cont_300_bf_scaffold_2513_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5507..6211)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZR9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF96006.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2513_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6238..7188)
DNA (951bp) protein (317aa)
Glutathione synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; EC=6.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00162};; GSH synthetase {ECO:0000256|HAMAP-Rule:MF_00162}; Glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00162}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
glutathione synthetase (EC:6.3.2.3); K01920 glutathione synthase [EC:6.3.2.3]
Glutathione synthetase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QG12_BREDI
SCNpilot_cont_300_bf_scaffold_2513_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7352..8164)
DNA (813bp) protein (271aa)
Tetratricopeptide repeat domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZS0_BREDI
Tetratricopeptide repeat domain protein {ECO:0000313|EMBL:EGF96007.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2513_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8161..8589)
DNA (429bp) protein (143aa)
UPF0102 protein HMPREF0185_02313 n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QG41_BREDI
UPF0102 protein HMPREF0185_02313 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein; K07460 putative endonuclease
SCNpilot_cont_300_bf_scaffold_2513_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8586..9458)
DNA (873bp) protein (291aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QGV7_BREDI
SCNpilot_cont_300_bf_scaffold_2513_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9578..10117
DNA (540bp) protein (180aa)
Hydrolase/acyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZS1_BREDI
Hydrolase/acyltransferase {ECO:0000313|EMBL:EGF96008.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2513_curated_14
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10124..10267
DNA (144bp) protein (48aa)
Hydrolase/acyltransferase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZS1_BREDI
Hydrolase/acyltransferase {ECO:0000313|EMBL:EGF96008.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
putative signal peptide protein
SCNpilot_cont_300_bf_scaffold_2513_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10272..11525)
DNA (1254bp) protein (418aa)
oxygen-independent coproporphyrinogen III oxidase; K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Putative oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QFX1_BREDI
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:EKY26899.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_2513_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11518..11832)
DNA (315bp) protein (105aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae;
deoxyribonucleotide triphosphate pyrophosphatase (EC:3.6.1.-); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
Non-canonical purine NTP pyrophosphatase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZS3_BREDI
Displaying 16 items

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