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SCNpilot_cont_300_bf_scaffold_1310_curated_13

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(13153..14067)

Top 3 Functional Annotations

Value Algorithm Source
Translocation protein in type III secretion n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQ61_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 49.3
  • Coverage: 290.0
  • Bit_score: 248
  • Evalue 6.20e-63
NODE_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97165.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 254.0
  • Bit_score: 252
  • Evalue 1.00e-63
hscU; translocation protein in type III secretion; K03229 type III secretion protein SctU similarity KEGG
DB: KEGG
  • Identity: 40.8
  • Coverage: 260.0
  • Bit_score: 200
  • Evalue 6.10e-49

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Taxonomy

Lysobacter sp. A03 → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 915
GTGGCCCTGTTCGCGTCGCTGATGGAGTTCCTGCAGACCGGGCCGGTCTTCACGCTGGAGAAGATGACGCCCAAGCTGGATCACCTGAACCCCGCCGAGGGGTTGAAGCGGATGTTCAACACCGACAACCTGTTCGAGGTGGCGAAATCGCTGGTGAAGACGGCTCTGCTGCTGGGACTGGCGGGGCTGATCCTGTTCGGCCAGTTCGATCGCATCCTGCGCCTGCCGGCGGCCCAGCCGGGCGAGGTGCTGGGCGCGTTCGGCGCGGCGGGGTTTCACCTGCTGGGCTGGACCCTGGTGGTCTTCGTGTTCGTCGCCATCCTGGATTCGGCCTATCAGCGCTTCAGCTTCATGAAGCGGCTGCGGATGAGCCGCCGCGACATCCGTCAGGAAGCCAAGGACATGGAGGGCGATCCCACGGTCAAGGCGCGGCGCCGCGAACTGGCCCAGGAATGGGCCCAGTCCAGCGCCGTCGGGTCCGTGCGCGGGGCCGCGGCCCTGGTGGTCAATCCGACCCACATTGCCGTGTCCCTGGCCTATGATCCCGGCGAGCACGTGGTGCCGGTGGTGGCGGGCAAGGGCGACGGCCTGATCGCGCGCGCCATGCGCGGCATGGCCGAGCGCGAAGGGGTGCCGATCATCCGCAACGTCCCTCTGGCCCGCGCCCTGCACGAACAGGTGCCGGTCGAGGCCGTGGTGCCCGAGGACATGTTCGCCGCCGTCGCCGAAGTGATCCTGACCGCGCGCCACCTGCGCGATGAAGCGGCGCGCGGCGAGACGCTCGACCCGGTCGACCTGTCGGACGAAGGCGAAGGATTGGGCGACGCCGCCGGGTCCGAGGACGCTTTCCGCCGCGCGCCCCTCTTTCCCGCCATGCCGGACGACGGCGTGGCTTCCGCCTCGGAGACCCGATGA
PROTEIN sequence
Length: 305
VALFASLMEFLQTGPVFTLEKMTPKLDHLNPAEGLKRMFNTDNLFEVAKSLVKTALLLGLAGLILFGQFDRILRLPAAQPGEVLGAFGAAGFHLLGWTLVVFVFVAILDSAYQRFSFMKRLRMSRRDIRQEAKDMEGDPTVKARRRELAQEWAQSSAVGSVRGAAALVVNPTHIAVSLAYDPGEHVVPVVAGKGDGLIARAMRGMAEREGVPIIRNVPLARALHEQVPVEAVVPEDMFAAVAEVILTARHLRDEAARGETLDPVDLSDEGEGLGDAAGSEDAFRRAPLFPAMPDDGVASASETR*