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SCNpilot_cont_300_bf_scaffold_1310_curated_16

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 17416..18954

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion outer membrane pore, YscC/HrcC family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLU3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 43.1
  • Coverage: 517.0
  • Bit_score: 398
  • Evalue 1.40e-107
Type III secretion outer membrane pore, YscC/HrcC family {ECO:0000313|EMBL:EHR71429.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.1
  • Coverage: 517.0
  • Bit_score: 398
  • Evalue 2.00e-107
type III secretion outer membrane pore, yscc/hrcc family; K03219 type III secretion protein SctC similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 533.0
  • Bit_score: 276
  • Evalue 1.50e-71

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Taxonomy

Burkholderiales bacterium JOSHI_001 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGACGATCAAGACGCCGCCCGCCCGCAAAGGCTTCAAGACCGCCCTCCTGACCGTGGCTTCCTTGGCCACGCTGCTCGGCCTGTCCGCGCCCGCTGCGGCGGGCGACCCGCCCATCGGCAACCAGACCCTGCAGATCGCCCCGCGCGAACAGCCGGTGGGTCAGTTCCTGCAGAGCTTCTTCGGCCAGTTGGGCGTGCCGGTCATCATCAGCCCCAACCTGCGCGGCACGGTGAACGGCGCCTTCAGCGGCCCGGCCTCGACCATCTTCAGCCAGGTGGCGGACGCCTTCGACCTGGTGGCCTATTACGACGGCGGGGCGGTCTACATCTATCAGACCTCCGAACTGACCAGCCAGTCGATCCCCGCCTCGCCGCAGATGCTGCGCCGCGTGCGCGCCACGGCGCAGGAAATGGGCCTGCTGGACAGCCGCAACACCCTTCAGCCCGCCGGGCAGATGCTGGTCGCCAACGGCACCCGCCGCTTCATCCAGCAGATCGACGAGATCGCCCGGGCCGGCCCCGGCGCTCGGGCCGAAGCCGCCCAGCCGACCTACGAATACCGCGTCTTCACCCTGCGCTACGCCTGGGCCGATGACGTGACCTTCGAGACGGCCCAGAGCGAAGTCACCATTCCGGGCGTCGCCTCCATCCTGCGCGCCATGGTCAGCAACGACCCGAACGGCGCCGTCGCCCGGCGCATCGAGACCCGCCGCTCGCCGCGCGTCGGGGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGATGGACGCCAGCTATGTCGATGGCGGCTTCACCCCCACGCCGGACACGCTCGGCCTGGCCCTGGCCGACGAACAGATGGCGGGCGGCGCCCCGGTCCAGCACGCGCGCATCCAGGCCGACACGCGCCTGAACGCCGTCATCGTGCGCGACACGGCCGACCGCATGGGGGCCTATGAGGCGCTGATCGCCGCCCTGGACAAGGAGCCGCAGCTTCTCGAAATCCAGGCCACCATCATCGACATCGACACGACCCGCGCGCGTCAGCTGGGCATCAGCTGGCGCTTCGACGACGGACGCGGCGGCATCCTGTTCGGCGACGGCACGCGCAACGACGACCGCCTGCGTCGCGGCCAGGACATCACCCCGCGCAACAACGGCCTGGCCATCTCGACCATCATCGGCAACGGCGACTACTTCGTCTCGCGCATCACGGCGATGGAGGATGAAGGCGTCGCCCGCATCGTCTCGCGGCCGCAGATCGTCACCCTGTCTAACGTCCAGGCCCTGTTCGAGAACACCCGCAGCTTCTACGTCGGCCTGGAAGGCGAGCGGGACGTCGACCTCTACAACGTCACCGCCGGGACCACGCTGAAGGTCACGCCGCACGTCCTGCGCGACCAGAACCAGACCCGTATCCGGATGCAGATCCAGATCGAGGACGGCTCCCTGACCGACGCCGACGTCGACGACATCCCGGTCGTGCAGCGCGCGGCCCTGAACACCCAGGCCATGATCCTGGAAGGGCAGAGCCTGCTGCTG
PROTEIN sequence
Length: 513
MTIKTPPARKGFKTALLTVASLATLLGLSAPAAAGDPPIGNQTLQIAPREQPVGQFLQSFFGQLGVPVIISPNLRGTVNGAFSGPASTIFSQVADAFDLVAYYDGGAVYIYQTSELTSQSIPASPQMLRRVRATAQEMGLLDSRNTLQPAGQMLVANGTRRFIQQIDEIARAGPGARAEAAQPTYEYRVFTLRYAWADDVTFETAQSEVTIPGVASILRAMVSNDPNGAVARRIETRRSPRVGGXXXXXXXXXXXXXXXLMDASYVDGGFTPTPDTLGLALADEQMAGGAPVQHARIQADTRLNAVIVRDTADRMGAYEALIAALDKEPQLLEIQATIIDIDTTRARQLGISWRFDDGRGGILFGDGTRNDDRLRRGQDITPRNNGLAISTIIGNGDYFVSRITAMEDEGVARIVSRPQIVTLSNVQALFENTRSFYVGLEGERDVDLYNVTAGTTLKVTPHVLRDQNQTRIRMQIQIEDGSLTDADVDDIPVVQRAALNTQAMILEGQSLLL