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SCNpilot_cont_300_bf_scaffold_2804_curated_6

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: comp(4573..7299)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 908.0
  • Bit_score: 1765
  • Evalue 0.0
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 908.0
  • Bit_score: 1558
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8G7_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 908.0
  • Bit_score: 1765
  • Evalue 0.0

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2727
ATGTACGCCGCCGTCAGCGAGGGCGCGCGCCGTCAAGGCGTCGAGCACTGGCTGCCGCTGTTCTACGACCGGCTGGATACGTTGTTCGACTATCTGCCGGATGCGGCGCCGGTCTTTCTCGACAGCCAGACGGAGCAGGCGCGTACGGAGCGCTGGAACCTGACCGTCGACGCCTATGAGGCGCGCAAGGAGGCGGCGCGCGGCAAGGGCGGGGCGGCCTATCGCGCCCTGCCGCCCGCGCGGCTCTATCTGGACGACGGCGACTGGAACAGCGCGCTGGCCGGTCGCGCCGTGCGCCGGCTGTCGCCCCTGGCGGCCGGGGCGGGCGAGGATGCAGGCGGCCGTCTGGGCCGCAGCTTCGCCGCCGAGCGGTCGCAGGATAGCGTCAACTTGTTCGCCGCCGTCGCTCAGCACGCCGAGGCGCTGAAGGGGCAGGGCAAGCGCGTCCTGTTCGCATCATGGTCCGAAGGCTCGGCCGAGCGTCTGGCCGCCATGCTGGGCGATCACGGCCTGACGCACGTCGTGGCGGTGCGCGACTGGGACGATGTGCAAGGCGCGCCGGACGGCATCTATCTGCGGGCGGTGTTGCCGGTCGAGCACGGCTTCGCCACCGACGATCTGGCCGTCATCTCCGAGACCGACATCCTGGGCGACCGCCTAGCACGGCCTAAGCGCAAGCGGCGGGCGTCCAACTTCCTGGCCGAGGCTTCGGCCCTGACGGCGGGCGATCTGGTGGTTCACCTGGATCACGGCATCGGCCGCTATGAGGGCCTGCGGACGCTGGAGATCCAGGAGGCGCCGCACGACTGCCTCGAACTCCTCTATGCGGGTGAGAGCAAGCTCTACCTGCCGGTTGAAAACATTGACCTTCTGACGCGCTACGGCACGGACGCCGAAGGGGTTCAGCTGGACCGTCTGGGCGGCGCGGGCTGGCAGGCGCGTAAGGCCAAGGCCAAGGAGCGCCTGCGCGCCATGGCCGAGGGGCTGATCGCTTTGGCGGCCAAGCGGGCGCTGCGGGTGTCCGACGCCATCACGCCGCCCGCGGGTCTGTTCGACGAGTTCTGCGCCCGCTTCCCGTATGAGGAGACGGACGACCAGTTGAACGCCATCGGCGACGTGCTGGAAGATCTGGGCAAGGGCACGCCGATGGATCGCCTGATCTGCGGCGACGTCGGCTTCGGCAAGACGGAGGTGGCGTTGCGCGCCGCCTTCGTCGTCGCCATGACAGGCCAACAGGTGGCTATCGTCTGCCCGACGACACTGCTGGCGCGTCAGCACTTCAAGACTTTCAGCGAACGCTTCGCCGGTTGGCCGATCAAGGTGCGCCACCTGTCGCGCATGGTCACGGCCAAGGATGCGAACGAGACGCGCGCGGGGCTGAAGGACGGCAGTTTCGAGATCGTCGTCGGCACCCACGCGGTTCTGGCCGATCAGGTTGGCTTCAAGGATCTGGGCCTCGTCATCGTCGACGAGGAGCAGCACTTCGGCGTCAAGCACAAGGAGAAGCTGAAGTCCCTGCGGGCCGATGTTCACCTGCTGACTCTGACGGCCACGCCGATCCCGCGCACGCTGCAGATGGCGCTGTCGGGCATCCGCGAGATGTCGATCATCGCCACCCCGCCGGTCGATCGTCTGGCTGTGCGGACCTATGTCACGCCGTGGGATCCCGTGCTGGTGCGCGAGGCCCTGCTGCGCGAGAAGTATCGCGGCGGTCAGGCCTATTACGTCGCGCCGCGCCTGAAGGATCTACCCGACATCGAGCGGTTCCTGCGTGAACAGGTGCCTGAGGTGAAGTTCGTCGTCGGCCACGGCCAGATGAGCCCGACCCAGTTGGAAGCCGTCATGAGCGCCTTCTACGACGGCGAATATGACGTGCTTGTCTCGACCACCATCGTCGAGAGCGGCATCGATATTCCGACCGCCAACACGCTGGTCGTGCATCGCGCGGACATGTTCGGTCTGGCCCAACTTCACCAGATCAGGGGCCGGATCGGCCGGTCCAAGGCGCGGGCCTTCGCCTATCTGACGACCGATCCGACCAAGCCGCTGAGCCTGTCGGCGGAACGCCGTCTGCAGGTGTTGCAGTCGCTGGACAATCTGGGCGCGGGCTTCCAGTTGGCCAGCCACGACCTGGACCAGCGCGGCGGCGGCAACCTGCTGGGCGACGAACAGTCGGGCCACATCCGCGAGGTTGGCGTCGAACTGTATCAGCAGATGCTGGAAGACGCCGTCGCCGAACTGCGCGAGCAGGGCGAGGCGGCGCCGGATCGTGGCTGGTCGCCTTCGATCAACGTCGGCGCGGCCGTTTTGATTCCAGAGGATTATGTCCCAGACCTGAACGTCCGTCTGAGCCTGTATCGCCGCCTGTCCGACGCAGAGAAGATGGAGGACCGGGAGGCCATGGCCGCCGAACTGATCGACCGGTTCGGACCCTTGCCGGACGAGGCGCAGCAGCTTCTGCGGATCGTGGGGATCAAGGCCAACTGCCGCACGGCCATGATCGAGAAGATCGACATCGGGCCCAAGGGCGCGGTGCTGACCCTGCGCAACAACACCTTCCCCAACCCGATGGGGCTGGTGGGTCTGATCCAGAAGAACCACGCCTTCTGGAAGATCCGTCCGGATCAGAAGATCGTGGTGAAGGGCGATTGGCCCACGCCGGAGGATCGACTGAAGGTCGCCGAGCGCATCACCGCCGATCTGGCGCGGGTGGCGGGGGCGGCCTAG
PROTEIN sequence
Length: 909
MYAAVSEGARRQGVEHWLPLFYDRLDTLFDYLPDAAPVFLDSQTEQARTERWNLTVDAYEARKEAARGKGGAAYRALPPARLYLDDGDWNSALAGRAVRRLSPLAAGAGEDAGGRLGRSFAAERSQDSVNLFAAVAQHAEALKGQGKRVLFASWSEGSAERLAAMLGDHGLTHVVAVRDWDDVQGAPDGIYLRAVLPVEHGFATDDLAVISETDILGDRLARPKRKRRASNFLAEASALTAGDLVVHLDHGIGRYEGLRTLEIQEAPHDCLELLYAGESKLYLPVENIDLLTRYGTDAEGVQLDRLGGAGWQARKAKAKERLRAMAEGLIALAAKRALRVSDAITPPAGLFDEFCARFPYEETDDQLNAIGDVLEDLGKGTPMDRLICGDVGFGKTEVALRAAFVVAMTGQQVAIVCPTTLLARQHFKTFSERFAGWPIKVRHLSRMVTAKDANETRAGLKDGSFEIVVGTHAVLADQVGFKDLGLVIVDEEQHFGVKHKEKLKSLRADVHLLTLTATPIPRTLQMALSGIREMSIIATPPVDRLAVRTYVTPWDPVLVREALLREKYRGGQAYYVAPRLKDLPDIERFLREQVPEVKFVVGHGQMSPTQLEAVMSAFYDGEYDVLVSTTIVESGIDIPTANTLVVHRADMFGLAQLHQIRGRIGRSKARAFAYLTTDPTKPLSLSAERRLQVLQSLDNLGAGFQLASHDLDQRGGGNLLGDEQSGHIREVGVELYQQMLEDAVAELREQGEAAPDRGWSPSINVGAAVLIPEDYVPDLNVRLSLYRRLSDAEKMEDREAMAAELIDRFGPLPDEAQQLLRIVGIKANCRTAMIEKIDIGPKGAVLTLRNNTFPNPMGLVGLIQKNHAFWKIRPDQKIVVKGDWPTPEDRLKVAERITADLARVAGAA*