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SCNpilot_cont_300_bf_scaffold_2804_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2804_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..310)
DNA (309bp) protein (103aa)
GGDEF domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYT1_BREDI
GGDEF domain protein {ECO:0000313|EMBL:EGF94702.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
diguanylate cyclase; K13591 two-component system, cell cycle response regulator PopA
SCNpilot_cont_300_bf_scaffold_2804_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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581..1510
DNA (930bp) protein (310aa)
Ribonuclease BN-like family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYT2_BREDI
Ribonuclease BN-like family protein {ECO:0000313|EMBL:EGF94703.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ribonuclease BN; K07058 membrane protein
SCNpilot_cont_300_bf_scaffold_2804_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1476..1706)
DNA (231bp) protein (77aa)
SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
SirA family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYT3_BREDI
SirA family protein {ECO:0000313|EMBL:EGF94704.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_2804_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1718..2212)
DNA (495bp) protein (165aa)
Competence/damage-inducible protein CinA C-terminal domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYT4_BREDI
Competence/damage-inducible protein CinA C-terminal domain protein {ECO:0000313|EMBL:EGF94705.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
cinA; putative competence-damage inducible protein; K03743
SCNpilot_cont_300_bf_scaffold_2804_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2286..4562
DNA (2277bp) protein (759aa)
Integral membrane protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYT5_BREDI
Integral membrane protein {ECO:0000313|EMBL:EGF94706.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
spermine/spermidine synthase protein
SCNpilot_cont_300_bf_scaffold_2804_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4573..7299)
DNA (2727bp) protein (909aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-]
Transcription-repair-coupling factor n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q8G7_BREDI
SCNpilot_cont_300_bf_scaffold_2804_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7957..8286)
DNA (330bp) protein (110aa)
TPR repeat region n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q915_BREDI
TPR repeat region {ECO:0000313|EMBL:EKY24220.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein; K09159 hypothetical protein
SCNpilot_cont_300_bf_scaffold_2804_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8371..8565
DNA (195bp) protein (65aa)
DEAD/DEAH box helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12]
DEAD/DEAH box helicase family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QYT7_BREDI
DEAD/DEAH box helicase family protein {ECO:0000313|EMBL:EGF94708.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
Displaying 8 items

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