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SCNpilot_cont_300_bf_scaffold_3618_curated_5

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 1971..2966

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 331.0
  • Bit_score: 672
  • Evalue 2.70e-190
pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 330.0
  • Bit_score: 537
  • Evalue 3.90e-150
Pseudouridine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZF1_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 331.0
  • Bit_score: 672
  • Evalue 1.90e-190

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGAGCCGCGAAGTCCAGACCCTCTATGTCGCCGAGGATGAAGACGACATCCGCCTGGATCGCTGGTTCAAGCGCCGCTGGCCGCACCTGACCCACATCCAGGTCGAGAAGATGGCCCGCAGCGGCCAGATCCGCGTCGACGGCTCGCGGGTCAAGCCACAGGACCGCCTGACCGCGGGCGCCGCCGTGCGCGTGCCGCCGCTGCCGGACGCCAATCCGCGCAAGCCCGGCGACCTGCACGAACTGAGCGAGCGCGACATCGCCTACGCCAAGTCGCTGGTGCTGTACGAAGACCACATGGTCATCGCCCTGAACAAGCCGCACGGCCTGGCCGTGCAGGGCGGGACCAAGACGACCAAACATGTCGACCGTCTGTTGTCGGCCTGGGGCGAGGGGATGGACCGGCCGCGTCTGGTTCACCGTCTGGACCGCGACACCTCAGGCGTGCTGCTGCTGGGCAAGGGGCCGGAGGCGGCCAAGCGTCTGGCCGGCGCCTTCGCCCGGCGTCAGGCCAAGAAGACCTATTGGGCCATCGTCATCGGCAACCCCAAGCCTTCGGCCGGTCAGATCGACATGGCGCTGAAGAAGACCGGCATCAACGACTTCGAGATGATGCGCCCGGCCGAGCCCAAGGATGCCAAGGGTGAACCGGCCGAAACCGCCTTCGCCACCATCAGCCGCGCCGCCCACCGCGCGGCATGGATGGCGCTGCGCCCCTTCACCGGCCGCACGCACCAGCTGCGCGCCCATATGGCCGCCATCGGCCACCCCATCCTGGGCGACCCCAAATACGGCGACGACAAGTCGCGTGAACTGTCCGGCCCGCTGAAGCTGCAGCTTCACGCCCGCCGCATCGAGCTGGACCACCCGGGCGGCGGCAAGCTGATCGTCGAGGCTCCGCTCAGTCCTGAGATGAAAGCCGGTTTCAACCATTTCGGTTTCTCCGAGGACGAGGCCGACGAAGATCCCTTTGAGGGCGTGCGGCGGATGCGATGA
PROTEIN sequence
Length: 332
MSREVQTLYVAEDEDDIRLDRWFKRRWPHLTHIQVEKMARSGQIRVDGSRVKPQDRLTAGAAVRVPPLPDANPRKPGDLHELSERDIAYAKSLVLYEDHMVIALNKPHGLAVQGGTKTTKHVDRLLSAWGEGMDRPRLVHRLDRDTSGVLLLGKGPEAAKRLAGAFARRQAKKTYWAIVIGNPKPSAGQIDMALKKTGINDFEMMRPAEPKDAKGEPAETAFATISRAAHRAAWMALRPFTGRTHQLRAHMAAIGHPILGDPKYGDDKSRELSGPLKLQLHARRIELDHPGGGKLIVEAPLSPEMKAGFNHFGFSEDEADEDPFEGVRRMR*