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SCNpilot_cont_300_bf_scaffold_3618_curated

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3618_curated_1
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..518
DNA (516bp) protein (172aa)
Pseudouridine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZE7_BREDI
RNA pseudouridylate synthase family protein {ECO:0000313|EMBL:EGF94029.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
pseudouridine synthase
SCNpilot_cont_300_bf_scaffold_3618_curated_2
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

597..1091
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZE8_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94030.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3618_curated_3
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1095..1532)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZE9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94031.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein; K08983 putative membrane protein
SCNpilot_cont_300_bf_scaffold_3618_curated_4
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1576..1974
DNA (399bp) protein (133aa)
Putative fluoride ion transporter CrcB n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZF0_BREDI
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
CrcB protein; K06199 CrcB protein
SCNpilot_cont_300_bf_scaffold_3618_curated_5
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1971..2966
DNA (996bp) protein (332aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Pseudouridine synthase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZF1_BREDI
SCNpilot_cont_300_bf_scaffold_3618_curated_6
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2963..4468
DNA (1506bp) protein (502aa)
Tetratricopeptide repeat family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZV5_BREDI
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:EGF94034.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3618_curated_7
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4470..5156
DNA (687bp) protein (229aa)
HAD-superfamily hydrolase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
IndB protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZV6_BREDI
IndB protein {ECO:0000313|EMBL:EGF94035.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3618_curated_8
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6914..7405
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZV9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94038.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
SCNpilot_cont_300_bf_scaffold_3618_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7402..8037)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZW0_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94039.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3618_curated_10
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8248..10092
DNA (1845bp) protein (615aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
phosphoenolpyruvate carboxykinase (GTP) (EC:4.1.1.32); K01596 phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZW1_BREDI
SCNpilot_cont_300_bf_scaffold_3618_curated_11
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10145..11167
DNA (1023bp) protein (341aa)
FAD dependent oxidoreductase; K03153 glycine oxidase [EC:1.4.3.19]
FAD dependent oxidoreductase n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QKL5_BREDI
FAD dependent oxidoreductase {ECO:0000313|EMBL:EKY28245.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
SCNpilot_cont_300_bf_scaffold_3618_curated_12
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11164..11895)
DNA (732bp) protein (244aa)
TonB family C-terminal domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZW3_BREDI
TonB family C-terminal domain protein {ECO:0000313|EMBL:EGF94042.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TonB family protein; K03832 periplasmic protein TonB
SCNpilot_cont_300_bf_scaffold_3618_curated_13
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12464..12805
DNA (342bp) protein (114aa)
Transglycosylase-like domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZW5_BREDI
Transglycosylase-like domain protein {ECO:0000313|EMBL:EGF94044.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
lytic transglycosylase
SCNpilot_cont_300_bf_scaffold_3618_curated_14
unknown

Not on your lists

comp(12981..13208)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3618_curated_15
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13561..13992
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZW6_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94045.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3618_curated_16
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14018..14488)
DNA (471bp) protein (157aa)
Hpt protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZW7_BREDI
Hpt protein {ECO:0000313|EMBL:EGF94046.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
histidine phosphotransferase domain-containing protein
SCNpilot_cont_300_bf_scaffold_3618_curated_17
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14569..15348)
DNA (780bp) protein (260aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
ATP-NAD/AcoX kinase; K00858 NAD+ kinase [EC:2.7.1.23]
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZW8_BREDI
SCNpilot_cont_300_bf_scaffold_3618_curated_18
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15380..16486)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZW9_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94048.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3618_curated_19
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16657..17418
DNA (762bp) protein (254aa)
Class II Aldolase and Adducin N-terminal domain protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZX0_BREDI
Class II Aldolase and Adducin N-terminal domain protein {ECO:0000313|EMBL:EGF94049.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
class II aldolase/adducin family protein
SCNpilot_cont_300_bf_scaffold_3618_curated_20
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17434..18147
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZX1_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EGF94050.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3618_curated_21
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18258..19406
DNA (1149bp) protein (383aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZX2_BREDI
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EGF94051.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
RND family efflux transporter MFP subunit
SCNpilot_cont_300_bf_scaffold_3618_curated_22
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19549..21528
DNA (1980bp) protein (660aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZX3_BREDI
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:EGF94052.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_cont_300_bf_scaffold_3618_curated_23
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21630..22565
DNA (936bp) protein (312aa)
AcrB/AcrD/AcrF family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZX3_BREDI
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:EGF94052.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_cont_300_bf_scaffold_3618_curated_24
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22724..23263)
DNA (540bp) protein (180aa)
Cytochrome c2 n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZX4_BREDI
Cytochrome c2 {ECO:0000313|EMBL:EGF94053.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
cytochrome C class I; K08738 cytochrome c
SCNpilot_cont_300_bf_scaffold_3618_curated_25
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23342..23968)
DNA (627bp) protein (209aa)
Bacterial regulatory protein, tetR family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4QZX5_BREDI
Bacterial regulatory protein, tetR family protein {ECO:0000313|EMBL:EGF94054.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
TetR family transcriptional regulator
Displaying 25 items

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