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SCNpilot_cont_300_bf_scaffold_4028_curated_1

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 1..879

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 292.0
  • Bit_score: 583
  • Evalue 1.90e-163
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 292.0
  • Bit_score: 535
  • Evalue 7.70e-150
DNA-directed RNA polymerase subunit beta n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1I9_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 292.0
  • Bit_score: 583
  • Evalue 1.30e-163

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGAAGATGGTCAAGGTCTTCGTGGCCGTGAAGCGCAAGCTTCAGCCGGGCGACAAGATGGCCGGCCGTCACGGGAACAAGGGCGTCATCTCCAAGATCCTGCCGATCGAGGACATGCCGCACCTGGACGACGGCACCCACGTCGACATCGTTCTGAACCCGCTGGGCGTGCCGTCGCGCATGAACATCGGCCAGATCTTCGAAACCCACCTGGGTTGGGCCGCCGCTGGCCTGGGCAAGCAGATCAAGGGCTTGCTCGAGCAGTGGATGGACGGCGGCATGCGCGACGCCCTGGTGTCGCGTCTGACCCAGATCTACGGCGCCGACACACCGCTGCCGCAGAGCGACGAAGAACTGATCGAACTGGCCCAGAACCTGTCCAAGGGCGTTCCGTTCGCGACCCCGGTCTTCGACGGCGCGCGCATCTCGGACATCGAGGATCTGCTGGAATCGGCCGATCTGGATCGTTCGGGTCAGTCGATCCTGTTCGACGGCCAGACGGGCGAGCAGTTCAAGCGTCCGGTCACGGTCGGCTATGTGTACATGCTGAAGCTGCACCACCTGGTCGACGACAAGATCCACGCCCGCTCGATCGGCCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGTAAGGCGCAGTTCGGCGGTCAGCGCTTCGGGGAAATGGAGGTCTGGGCTCTGGAAGCTTACGGCGCCGCCTACACCCTGCAGGAAATGCTGACGGTGAAGTCGGACGACGTGGCCGGCCGGACCAAGGTCTACGAGGCCATCGTCCGCGGCGACGACAGCTTCGAGGCCGGCATCCCCGAGTCCTTCAACGTGCTGGTGAAGGAAATGCGCTCGCTGGGCCTGAACGTGGAGCTGGAAAACAGCTGA
PROTEIN sequence
Length: 293
MKMVKVFVAVKRKLQPGDKMAGRHGNKGVISKILPIEDMPHLDDGTHVDIVLNPLGVPSRMNIGQIFETHLGWAAAGLGKQIKGLLEQWMDGGMRDALVSRLTQIYGADTPLPQSDEELIELAQNLSKGVPFATPVFDGARISDIEDLLESADLDRSGQSILFDGQTGEQFKRPVTVGYVYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDSFEAGIPESFNVLVKEMRSLGLNVELENS*