ggKbase home page
Advanced Search
Search Help

SCNpilot_cont_300_bf_scaffold_4028_curated_2

Organism: scnpilot_dereplicated_Brevundimonas_1

near complete RP 48 / 55 MC: 2 BSCG 44 / 51 MC: 3 ASCG 10 / 38
Location: 979..5172

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2738
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 999.99
  • Bit_score: 2510
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R1I8_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2738
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4194
ATGAACCAGGAAGTCCTGAACATCTTCAACCCGGTCCCGGTCACCCCGACCTTCGACCAGATCAAGATCGCCCTGGCCTCGCCGGAGAAGATCCGTTCGTGGTCGTTCGGCGAGATCAAGAAGCCGGAAACCATCAATTACCGCACGTTCAAGCCCGAGCGTGACGGCCTGTTCTGCGCCCGTATCTTTGGCCCGACCAAGGACTACGAATGCCTGTGCGGCAAGTACAAGCGCATGAAGTACAAGGGCATCATCTGCGAGAAGTGCGGCGTTGAAGTCACCCTGGCTCGCGTTCGCCGCGAGCGCATGGGTCACATCGACCTGGCCGCTCCGGTCGCCCACATCTGGTTCCTGAAGTCGCTGCCGTCGCGCATCTCGCTGATGCTGGACATGGCGCTGAAGGACGTCGAGCGCGTCCTGTACTTCGAGAACTACATCGTCACCGAGCCGGGCCTGACCCCGCTGAAGCAGAACCAGCTGCTGACGGAAGACGAATTCTATCACTATCAGGAAGAGTTCGGCGACGACGGCTTCACCGCCGAGATCGGCGCCGAGGCGGTCCGCAACCTGCTGATGGCGATCGACCTGAACGCCGAGGCCGAGAAGCACCGCGCCGAACTGGCCGACAGCGCGTCGGAGCTGAAGGCCAAGAAGGCCTCCAAGCGTCTGAAGCTGATGGAAGCCTTCATCGAGTCGGGCAACAAGCCCGAGTGGATGATCCTGACCATCGTGCCGGTCATCCCGCCGGAACTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGTTTCGCGACCTCGGACCTGAACGACCTGTATCGCCGGGTCATCAACCGGAACAACCGCCTGAAGCGCCTGATCGAACTGCGCGCGCCGGACATCATCATCCGCAACGAAAAGCGGATGCTGCAGGAATCCGTCGACGCCCTGTTCGACAACGGCCGTCGCGGTCGCGTCATCACCGGCGCGAACAAGCGTCCGCTGAAGTCGCTGGCCGACATGCTGAAGGGCAAGCAGGGTCGCTTCCGTCAGAACCTGCTGGGCAAGCGCGTCGACTATTCGGGCCGTTCGGTCATCACCGTGGGCCCCGAGCTGAAGCTGCACGAGTGCGGCCTGCCCAAGAAGATGGCGCTGGAGCTGTTCAAGCCGTTCATCTACGCGCGTCTGGACGCCAAGGGCCTGTCGGGCACCGTCAAGCAGTCCAAGCGCATGGTCGAGCGCGAGCAGCCCGCCGTCTGGGACATCCTGGACGAGGTCATCCGCGAGCACCCGGTCCTGCTGAACCGCGCCCCGACGCTGCACCGTCTGGGCATCCAGGCGTTCGAGCCCAAGCTGATCGAGGGCAAGGCCATCCGCCTGCACCCGCTGGTCTGTACGGCGTTCAACGCTGACTTCGACGGCGACCAGATGGCCGTGCACGTCCCGCTGAGCCTCGAGGCCCAGCTGGAAGCGCGCGTGCTGATGATGTCGACGAACAACATCCTGTCGCCCGCCAACGGCAAGCCGATCATCGTGCCGTCGCAGGACATCGTCCTGGGTCTGTACTACCTGTCGCTGGTCAAGGAGAACCAGCCGGGCGAGGGCAAGCTGTTCGCCAACATGGGCGAGATCGACGCGGCGCTGGACGCCCAGGTCGTCAAGCTGCACACCAAGATCAAGGCGCGCTGGACCGAGATGAACTCGGACGGCGAAGTCGTGACCAAGGTGATCGACACCACGCCGGGCCGGATGAAGCTGGGCGCTCTGCTGCCGCTGAACCCGAACATCGGCTACAAGCTTCTTGAGAAGAACCTGACCAAGAAGGAAATCGGCAACCTGATCGATCAAGTCTACCGTCACTGCGGTCAGAAGGCGACGGTCATCTTCGCCGACCAGATGATGCAGATGGGCTTCCGTGAAGCGGCCAAGGCCGGCATCTCGGTGGGCAAGGACGACATCGTCATCCCGGCCAAGAAGGAACAGTTGGTCAACGAAACCCGCACCCAGGTGGAAGAGTACGAGCAGCAATATGCTGACGGCCTGATCACCAAGGGCGAGAAGTACAACAAGGTCGTCGACGCCTGGGCCAAGGCCACGGACAAGATCGCCGATGAGATGATGGGCGAGATCGCTCAGCCGCGCGTCCTGATCAAGGGTCAGGAGCCGGACATCAACTCGGTCTTCATGATGGCCAACTCGGGCGCTCGTGGCTCGCAGGCTCAGATGAAGCAGCTGGGCGGCATGCGCGGCCTGATGGCCAAGCCCTCGGGCGAGATCATCGAGACGCCGATCATCTCGAACTTCAAGGAAGGCCTGACCGTCCTTGAGTACTTCAACTCGACCCACGGCGCCCGTAAGGGTCTGGCCGACACCGCGCTGAAGACCGCCAACTCGGGTTATCTGACCCGTCGTCTGGTGGACGTGGCGCAGGACTCCATCGTCACCGAGGAAGACTGCGGCTCGACGCGCGGCATCACCCTGCGCGCCGTGGTCGAAGGCGGCGACGTCCTGGTCTCGCTGGGCCAGCGCGTCCTGGGCCGTTACGCGGCCGAGGACATCAAGGAGCCGGGCGGCGAAGTCCTGTTCCCTGCGGACACCTATCTGCAGGAAGAGGAAGTCGAGCTGATCGACAAGGTCGGCGTCCAGTCCATCAAGGTCCGTTCGGCCCTGACGTGTGAAGCCGACGCCGGCATCTGCGGCATGTGCTACGGCCGTGACCTGGCGCGCGGCACCAACGTCAACATCGGTGAAGCGGTCGGCGTCATCGCCGCCCAGTCGATCGGCGAGCCGGGCACCCAGCTGACGATGCGTACCTTCCACATCGGCGGTACGGCCCAGGTTGCGGAAACCTCGTTCTTCGAGGCGACCAACGCGGGCGTCATCAAGGTCGTCGGCCCGACCGTTATCGCCGCTCACGGCGATCCGGTGGCGATGAGCCGCAACGTCGTGGTCACCGTGACCGTCGACGGCAAGGACCGCGAATCCTACAAGGTGCCTTACGGCGCGCGCCTGCGCGTCAAGGACGGCGGCGAGGTGGTCAAGAACCAACGCCTGGCCGAGTGGGATCCGTACACCACCCCGATCCTGACGGAAGTCGGCGGCGTGGTGCGCTTCGAGGATCTGGTCGAGGGCCTGTCGGTCAAGGAAGAGACGGACGAGGCCACGGGCATCGCCCAGCGCGTCGTTTCCGACTGGCGCGCCAGCCCGCGCGGCGCGGACCTGCGTCCGGCCATGGGCGTCACCCAGGGCGACAGCTACGCCAAGCTGTCGAGCGGTTCTGACGCGCGTTACCTGCTGCCCGTGGGGGCCATCCTGTCGGTGGCCAACGGCGACGAGGTCAAGCCGGGCGACATCATCGCCCGTATCCCGACCGAAGGCGCCAAGACCCGCGACATCACCGGCGGTCTGCCGCGCGTGGCCGAACTGTTCGAAGCTCGTCGTCCGAAGGACTGCGCGGTCATCGCCGAGATGGATGGCCGTGTCGAATTCGGTCGCGACTACAAGAACAAGCGCCGCATCAAGATCACCCCGGAGCCGGATGCCGACGGCAACCAGGCCGAGGCGGTCGAGTTCCTGATCCCGAAGGGCAAGCACATCTCCGTCCACGACGGCGATCTGATCCAGAAGGGCGACTACATCATCGACGGCAACCCGGATCCGCACGACCTGCTGCGCATCCAGGGCGTCGAGGCGCTGGCCGAGTATCTGGTGAACGAAGTGCAGGAGGTCTACCGACTGCAGGGCGTGCCGATCAACGACAAGCACATCGAAGTCATCGTCCGTCAGATGCTGCAGAAGGTCGAGGTCATCGACTCCGCCGAGACGACGCTCATCAAGGGCGACCACGTCGATCGGGTCGAAGTCGACATCGAGAACGCCAAGGTCGAGAAGCGCGGCGGCCGCATCGCCACCGTGCAGCCGGTCCTGCTGGGCATCACCAAGGCGTCGCTGCAGACCCGCAGCTTCATCTCGGCGGCCTCGTTCCAGGAGACCACCCGCGTCCTCACCGAGGCTTCGGTCCACGGCAAGAAGGACACGCTGGAAGGCCTGAAGGAAAACGTGATCGTGGGTCGCCTGATCCCGGCGGGCACGGGCTCCTACCTGCGCAGCCTGCAGAAGATCGCCAACGAGCGTGACGCTGAGCTGACCCAGGCCCGCGAAGACGCGGTCGAGCCGCTTCCCGCGGACCTGGCTCTGGAACTGGAGCAGTCGGCCGACTGA
PROTEIN sequence
Length: 1398
MNQEVLNIFNPVPVTPTFDQIKIALASPEKIRSWSFGEIKKPETINYRTFKPERDGLFCARIFGPTKDYECLCGKYKRMKYKGIICEKCGVEVTLARVRRERMGHIDLAAPVAHIWFLKSLPSRISLMLDMALKDVERVLYFENYIVTEPGLTPLKQNQLLTEDEFYHYQEEFGDDGFTAEIGAEAVRNLLMAIDLNAEAEKHRAELADSASELKAKKASKRLKLMEAFIESGNKPEWMILTIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVITVGPELKLHECGLPKKMALELFKPFIYARLDAKGLSGTVKQSKRMVEREQPAVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPKLIEGKAIRLHPLVCTAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNILSPANGKPIIVPSQDIVLGLYYLSLVKENQPGEGKLFANMGEIDAALDAQVVKLHTKIKARWTEMNSDGEVVTKVIDTTPGRMKLGALLPLNPNIGYKLLEKNLTKKEIGNLIDQVYRHCGQKATVIFADQMMQMGFREAAKAGISVGKDDIVIPAKKEQLVNETRTQVEEYEQQYADGLITKGEKYNKVVDAWAKATDKIADEMMGEIAQPRVLIKGQEPDINSVFMMANSGARGSQAQMKQLGGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDSIVTEEDCGSTRGITLRAVVEGGDVLVSLGQRVLGRYAAEDIKEPGGEVLFPADTYLQEEEVELIDKVGVQSIKVRSALTCEADAGICGMCYGRDLARGTNVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGTAQVAETSFFEATNAGVIKVVGPTVIAAHGDPVAMSRNVVVTVTVDGKDRESYKVPYGARLRVKDGGEVVKNQRLAEWDPYTTPILTEVGGVVRFEDLVEGLSVKEETDEATGIAQRVVSDWRASPRGADLRPAMGVTQGDSYAKLSSGSDARYLLPVGAILSVANGDEVKPGDIIARIPTEGAKTRDITGGLPRVAELFEARRPKDCAVIAEMDGRVEFGRDYKNKRRIKITPEPDADGNQAEAVEFLIPKGKHISVHDGDLIQKGDYIIDGNPDPHDLLRIQGVEALAEYLVNEVQEVYRLQGVPINDKHIEVIVRQMLQKVEVIDSAETTLIKGDHVDRVEVDIENAKVEKRGGRIATVQPVLLGITKASLQTRSFISAASFQETTRVLTEASVHGKKDTLEGLKENVIVGRLIPAGTGSYLRSLQKIANERDAELTQAREDAVEPLPADLALELEQSAD*