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scnpilot_p_inoc_scaffold_793_curated

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Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_793_curated_1
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1187
DNA (1185bp) protein (395aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6B0_9BURK
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AFU44456.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_p_inoc_scaffold_793_curated_2
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1184..2335
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YCE2_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:CBA30470.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
diguanylate cyclase
scnpilot_p_inoc_scaffold_793_curated_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2371..3123)
DNA (753bp) protein (251aa)
Response regulator receiver protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G548_ALIDK
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEB86394.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_p_inoc_scaffold_793_curated_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3131..3814)
DNA (684bp) protein (228aa)
Response regulator receiver protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5I9_ACIDE
Response regulator receiver protein {ECO:0000313|EMBL:EER60265.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
excisionase family DNA binding domain-containing protein
scnpilot_p_inoc_scaffold_793_curated_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3889..4275
DNA (387bp) protein (129aa)
Response regulator receiver n=2 Tax=Alicycliphilus denitrificans RepID=E8TRW2_ALIDB
response regulator receiver
Response regulator receiver protein {ECO:0000313|EMBL:GAO24995.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_793_curated_6
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4272..5033
DNA (762bp) protein (254aa)
Metal dependent phosphohydrolase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5I7_ACIDE
metal dependent phosphohydrolase; K07814 putative two-component system response regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_793_curated_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5030..5845
DNA (816bp) protein (272aa)
Extracellular solute-binding protein family 3 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5I6_ACIDE
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_p_inoc_scaffold_793_curated_8
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5862..8348
DNA (2487bp) protein (829aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5I5_ACIDE
PAS/PAC sensor signal transduction histidine kinase
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_793_curated_9
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8345..10090
DNA (1746bp) protein (582aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5I5_ACIDE
integral membrane sensor signal transduction histidine kinase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
scnpilot_p_inoc_scaffold_793_curated_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10087..10776)
DNA (690bp) protein (230aa)
histidine kinase n=1 Tax=Acidovorax avenae RepID=UPI0002DF8F15
signal transduction protein with cbs domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ACM34207.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_p_inoc_scaffold_793_curated_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10860..12176
DNA (1317bp) protein (439aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11]
seryl-tRNA synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003676D75
scnpilot_p_inoc_scaffold_793_curated_12
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12773..13414
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023758D4
Uncharacterized protein {ECO:0000313|EMBL:KJA09544.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_793_curated_13
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13829..14848)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QU86_METTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK52361.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scnpilot_p_inoc_scaffold_793_curated_14
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14851..15933)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Escherichia albertii RepID=UPI0002BB4551
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
Periplasmic binding protein {ECO:0000313|EMBL:ACK52362.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
scnpilot_p_inoc_scaffold_793_curated_15
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15953..18346)
DNA (2394bp) protein (798aa)
TonB-dependent siderophore receptor n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6X943_METSD
TonB-dependent siderophore receptor
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ACT49663.1}; Flags: Precursor;; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
scnpilot_p_inoc_scaffold_793_curated_16
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18920..20080
DNA (1161bp) protein (387aa)
Transposase, IS30 family n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QKI9_AZOSU
transposase, IS30 family
Transposase, IS30 family {ECO:0000313|EMBL:AEV27728.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
scnpilot_p_inoc_scaffold_793_curated_17
Pseudomonas sp. MT-1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20846..21475)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Pseudomonas syringae pv. tabaci str. ATCC 11528 RepID=F3JZH1_PSESZ
Uncharacterized protein {ECO:0000313|EMBL:BAP81462.1}; TaxID=150396 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. MT-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_793_curated_18
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22183..22941
DNA (759bp) protein (253aa)
Restriction endonuclease n=1 Tax=Acidovorax sp. NO-1 RepID=H0BU14_9BURK
Restriction endonuclease {ECO:0000313|EMBL:EHL24106.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
restriction endonuclease
scnpilot_p_inoc_scaffold_793_curated_19
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22958..23446
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZC4_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER62320.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_p_inoc_scaffold_793_curated_20
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23448..25040)
DNA (1593bp) protein (531aa)
Flagellin n=1 Tax=Acidovorax sp. NO-1 RepID=H0BU12_9BURK
Flagellin {ECO:0000313|EMBL:EHL24104.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
fliC2; flagellin; K02406 flagellin
scnpilot_p_inoc_scaffold_793_curated_21
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25414..26025)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AQ96_PELPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK99516.1}; TaxID=338966 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
scnpilot_p_inoc_scaffold_793_curated_22
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26153..26461
DNA (309bp) protein (103aa)
Transcriptional regulator, XRE family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WXD6_COMTE
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EED65959.1}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
XRE family transcriptional regulator
scnpilot_p_inoc_scaffold_793_curated_23
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26954..27274)
DNA (321bp) protein (107aa)
Transcriptional regulator, XRE family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T835_ACIDE
Transcriptional regulator, XRE family {ECO:0000313|EMBL:EER59358.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
scnpilot_p_inoc_scaffold_793_curated_24
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27685..28875)
DNA (1191bp) protein (397aa)
Integrase family protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T837_ACIDE
Integrase family protein {ECO:0000313|EMBL:EER59360.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
putative phage integrase
scnpilot_p_inoc_scaffold_793_curated_25
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29433..30182)
DNA (750bp) protein (250aa)
LrgB family protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA38_ACISJ
LrgB family protein
LrgB family protein {ECO:0000313|EMBL:ABM43113.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_793_curated_26
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30172..30534)
DNA (363bp) protein (121aa)
LrgA family protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MCD6_ACIET
lrga family protein
LrgA family protein {ECO:0000313|EMBL:ABM43112.1}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_p_inoc_scaffold_793_curated_27
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30827..32215)
DNA (1389bp) protein (463aa)
GntR family transcriptional regulator n=2 Tax=Pseudomonas pseudoalcaligenes RepID=I7K2H7_PSEPS
GntR family transcriptional regulator {ECO:0000313|EMBL:CDM40473.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
GntR family transcriptional regulator
scnpilot_p_inoc_scaffold_793_curated_28
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32552..33979
DNA (1428bp) protein (476aa)
cytochrome bd ubiquinol oxidase subunit I; K00425 cytochrome d ubiquinol oxidase subunit I [EC:1.10.3.-]
Cytochrome bd ubiquinol oxidase subunit I n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KIK9_PSEPG
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ABY99164.1}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
scnpilot_p_inoc_scaffold_793_curated_29
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33995..35002
DNA (1008bp) protein (336aa)
cytochrome d ubiquinol oxidase subunit II; K00426 cytochrome d ubiquinol oxidase subunit II [EC:1.10.3.-]
ubiquinol oxidase subunit II, cyanide insensitive n=1 Tax=Pseudomonas putida RepID=UPI0002FF9918
Cytochrome d ubiquinol oxidase, subunit II {ECO:0000313|EMBL:ABY99163.1}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
scnpilot_p_inoc_scaffold_793_curated_30
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35270..35794)
DNA (525bp) protein (175aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA/protein-cysteine methyltransferase n=2 Tax=Alicycliphilus denitrificans RepID=E8U028_ALIDB
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:ADV01027.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Displaying items 1-30 of 71 in total

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