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scnpilot_p_inoc_scaffold_1161_curated

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1161_curated_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(250..774)
DNA (525bp) protein (175aa)
nicotinate phosphoribosyltransferase n=1 Tax=Acidovorax radicis RepID=UPI0002378682
xanthine phosphoribosyltransferase; K07101
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1161_curated_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(830..2203)
DNA (1374bp) protein (458aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] id=12552280 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2233..3384)
DNA (1152bp) protein (384aa)
class II tRNA synthetase id=12552281 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
class II tRNA synthetase; K02502 ATP phosphoribosyltransferase regulatory subunit
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3460..3675)
DNA (216bp) protein (72aa)
hypothetical protein; K09937 hypothetical protein id=12552282 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
hypothetical protein; K09937 hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_5
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3675..4574)
DNA (900bp) protein (300aa)
hflc protein; K04087 membrane protease subunit HflC [EC:3.4.-.-] id=12552283 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
HflC protein; K04087 membrane protease subunit HflC [EC:3.4.-.-]
Tax=GWA2_Burkholderiales_64_37_curated
scnpilot_p_inoc_scaffold_1161_curated_6
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4584..5894)
DNA (1311bp) protein (437aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-]
HflK protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q2Z0_ACIAP
HflK protein {ECO:0000313|EMBL:ADX45392.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1161_curated_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6002..7168)
DNA (1167bp) protein (389aa)
GTPase HflX n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4C3_ACIDE
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
GTP-binding protein HflX; K03665 GTP-binding protein HflX
scnpilot_p_inoc_scaffold_1161_curated_8
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7241..7495)
DNA (255bp) protein (85aa)
RNA-binding protein Hfq n=1 Tax=Curvibacter lanceolatus RepID=UPI00036D6890
protein hfq; K03666 host factor-I protein
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_p_inoc_scaffold_1161_curated_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7600..8943)
DNA (1344bp) protein (448aa)
GTP-binding protein Der id=12552287 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
GTP-binding protein Der
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8960..10102)
DNA (1143bp) protein (381aa)
Outer membrane protein assembly factor BamB n=1 Tax=Acidovorax sp. CF316 RepID=J0KM00_9BURK
Pyrrolo-quinoline quinone
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10099..10770)
DNA (672bp) protein (224aa)
hypothetical protein id=12552289 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10786..12120)
DNA (1335bp) protein (445aa)
histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21]
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Histidine--tRNA ligase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GEL0_ALIDK
scnpilot_p_inoc_scaffold_1161_curated_13
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12216..13490)
DNA (1275bp) protein (425aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1) id=12552291 bin=BDI species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_p_inoc_scaffold_1161_curated_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13490..14332)
DNA (843bp) protein (281aa)
hypothetical protein; K15539 cytoskeleton protein RodZ id=12552292 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein; K15539 cytoskeleton protein RodZ
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14436..15263)
DNA (828bp) protein (276aa)
type IV pilus biogenesis/stability protein PilW id=12552293 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
type IV pilus biogenesis/stability protein PilW; K02656 type IV pilus assembly protein PilF
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15265..16413)
DNA (1149bp) protein (383aa)
radical SAM protein id=12552294 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_17
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16495..16920)
DNA (426bp) protein (142aa)
nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
Nucleoside diphosphate kinase {ECO:0000255|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000255|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000255|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000255|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000255|HAMAP-Rule:MF_00451}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Nucleoside diphosphate kinase n=2 Tax=Acidovorax RepID=NDK_ACIAC
scnpilot_p_inoc_scaffold_1161_curated_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17008..18288)
DNA (1281bp) protein (427aa)
pseudouridine synthase id=12552296 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
pseudouridine synthase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_19
Delftia sp. RIT313, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18285..18962)
DNA (678bp) protein (226aa)
Segregation and condensation protein B n=1 Tax=Delftia acidovorans (strain DSM 14801 / SPH-1) RepID=A9BMV9_DELAS
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1468410 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. RIT313.;"
segregation and condensation protein B; K06024 segregation and condensation protein B
scnpilot_p_inoc_scaffold_1161_curated_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19200..20213)
DNA (1014bp) protein (338aa)
RluA family pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
Pseudouridine synthase n=1 Tax=Acidovorax sp. CF316 RepID=J0KM11_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20351..21223)
DNA (873bp) protein (291aa)
Peptidase M23B n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W569_ACISJ
peptidase M23B; K06194 lipoprotein NlpD
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21293..22084)
DNA (792bp) protein (264aa)
protein-L-isoaspartate O-methyltransferase id=12552301 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
protein-L-isoaspartate O-methyltransferase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_23
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22098..22856)
DNA (759bp) protein (253aa)
surE; stationary phase survival protein SurE (EC:3.1.3.6); K03787 5'-nucleotidase [EC:3.1.3.5] id=12552302 bin=BDI species=Delftia acidovorans genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
5'-nucleotidase surE-like
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23001..23975
DNA (975bp) protein (325aa)
zinc-binding alcohol dehydrogenase id=12552303 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
zinc-binding alcohol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1161_curated_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24086..25672
DNA (1587bp) protein (529aa)
diguanylate cyclase; K13590 diguanylate cyclase id=12552307 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
diguanylate cyclase; K13590 diguanylate cyclase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Displaying 25 items

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