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SCNpilot_expt_1000_bf_scaffold_1247_curated_6

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(4711..5823)

Top 3 Functional Annotations

Value Algorithm Source
Rod shape-determining protein RodA n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VVW4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 370.0
  • Bit_score: 524
  • Evalue 9.40e-146
Rod shape-determining protein RodA {ECO:0000313|EMBL:AIY43841.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.8
  • Coverage: 369.0
  • Bit_score: 527
  • Evalue 2.00e-146
rodA; Rod shape-determining protein rodA; K05837 rod shape determining protein RodA similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 369.0
  • Bit_score: 520
  • Evalue 4.30e-145

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Taxonomy

Collimonas arenae → Collimonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
GTGATCCACGACAAGCCCTCGCTGCTGGCTCGCATCCGCCCGCACGTCCTGGTGTTCGACGCGACCCTGCTGACGGCGCTCACGCTGCTGGTCGCGATGAGCCTGATGACCATGCACTCGGCGGCGCTCGACTTCGACGGGCGCATGGGCGACCACGCGCGCAACCTGTTCATCGCCTTCGCCGTCATGTGGGTCGCCGCGAGCCTGCCGCTGCAGTGGATCCAGCGCTCCGCGGTGCCGGCCTACGCGCTCGGGCTGGCATTGCTGGTGGCGGTGGCCCTGTTCGGCGACGTCGCCAAGGGCGCGCGGCGCTGGCTGGACCTCGGCGTGACGCGCATCCAGCCCTCCGAACTGATGAAGATCGCCATGCCCCTGATGCTGGCCTGGTACTTCCAGCGCCGCGAGGGCGCGCGCGGCTGGGTCGATTTCGTCGTGGCCGGGCTGCTGCTGGCGGTGCCGGTGGGGCTCATCGCGCGCCAGCCCGACCTGGGCACCGCGCTGCTGGTATCGTCGGCCGGCCTCTACGTGATCTTCCTCGGCGGCCTGAGCTGGAAGGTGATCGCCGGCGGCATCGTGGCCGGCCTCGCCTCGCTGCCGGTGCTGTGGTCGGTCATGCACGACTACCAGCGCCAGCGCATCCTGATGATGATCGACCCGTCGTCCGATCCGCTCGGCAAGGGCTTCCACGTGATCCAGTCGACCATCGCCGTGGGCTCGGGCGGCATCTGGGGCAAGGGCTGGATGGAGGGGACCCAGGCCCACCTGGAGTTCATCCCCGAGCGCACCACCGATTTCATCTTCGCGGTGTTCTCCGAGGAGTTCGGCCTCATCGGCAACGCCACCCTGCTGGCGATCTACCTGCTGGTGATCGGCCGCGGGCTGGTGATCGCCGCCAACGGAGCGACCCTCTTCGCGCGGCTGCTGGCGGGCGCCATCACCCTGGTCTTCTTCACCTATGCGTTCGTGAACGTCGGCATGGTGTCCGGGATCCTGCCGGTGGTGGGCGTGCCGCTGCCCCTGATGTCCTACGGCGGCACCGCCATGGTCACGCTGGGCATCGGCCTGGGCCTGCTGATGAGCATCGGCCGCCAGCGCAAGCTGATCCAGACCTGA
PROTEIN sequence
Length: 371
VIHDKPSLLARIRPHVLVFDATLLTALTLLVAMSLMTMHSAALDFDGRMGDHARNLFIAFAVMWVAASLPLQWIQRSAVPAYALGLALLVAVALFGDVAKGARRWLDLGVTRIQPSELMKIAMPLMLAWYFQRREGARGWVDFVVAGLLLAVPVGLIARQPDLGTALLVSSAGLYVIFLGGLSWKVIAGGIVAGLASLPVLWSVMHDYQRQRILMMIDPSSDPLGKGFHVIQSTIAVGSGGIWGKGWMEGTQAHLEFIPERTTDFIFAVFSEEFGLIGNATLLAIYLLVIGRGLVIAANGATLFARLLAGAITLVFFTYAFVNVGMVSGILPVVGVPLPLMSYGGTAMVTLGIGLGLLMSIGRQRKLIQT*