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SCNpilot_expt_1000_bf_scaffold_1247_curated_7

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5820..7772)

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein 2 n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F78F65 similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 652.0
  • Bit_score: 828
  • Evalue 5.30e-237
Penicillin-binding protein {ECO:0000313|EMBL:KIF83019.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 619.0
  • Bit_score: 808
  • Evalue 6.10e-231
penicillin-binding protein 2 (PBP-2) (MrdA); K05515 penicillin-binding protein 2 similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 636.0
  • Bit_score: 805
  • Evalue 8.90e-231

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1953
ATGGTCGAAGTCCGCGACACCGGCAAGGACCTGCGCCAGCTCAGGCTGCGCCTGGCGGTGGCGATGGTGTTCGTGATCTCCTGCTTCGGGGTGCTGGTCGCGCGCTTCGTCTACCTGCAGGTCTACCGCTACGCCGACTTCCACGCCCAGGCCGAGGAGAACCGCATCGCGCTGGTGCCGGCGCCGCCCTCGCGCGGGCTGATCTTCGATCGCAACGGCGTGCTGCTGGCCGAGAACGTCTCGGCCTACACGCTCGAGCTCCTGCCCAAGCGCGTCGCCGGGCTCGAGCCGACCATCGAGGCGCTGTCGCGCATCGTCGAGATCACCCCGCGCGACCGGCGCCGCTTCCGCCGCCTGCTGGAAGACTCGCGCAGCGCCGACAGCGTGCCGCTGAAGGTGCGCCTCAGCGACGAGGAGGTGGCGCGGCTGGCGGTGCAGCGCTTCCGCTTCCCCGGGGTGGAGATCCGCGCCCGGCTGTTCCGCAACTACCCGCTGGGCGAGACGGCCGCGCACGTCCTCGGCCACATCGGGCGCATCTCGCCCGAGGACAAGCGCCGGCTGGAGGAAGAGGAGCGGCTGTCGAACTACGCCGGCTCGACGCACATCGGCAAGATCGGCATCGAGCTGTCGTACGAGACGGCCCTGCACGGCCGCGCCGGCGCCGACGAGGTCGAGGTGTCGGCGGGCGGACGCGTCGTGCGCACGCTCTCGCGCACGCCGCCGGTGCCGGGCTCCAACCTGGTGCTGTCGATCGACGTGCGCCTGCAGAAGCTCGCCGAGGAGCTGTTCGGCGAGCGCCGGGGCGCCCTGGTGGCGATCGAGCCCGGGACCGGCGACGTGCTGGCCTTCGTGTCGAAGCCGAGCTTCGATCCCAACCTGTTCATCGACGGCATCGACCCGCAGGCCTGGCAGGCGCTCAACGAGGATCCCGACAAGCCGCTGCTGAACCGGCCGCTGCGCGGCACCTACCCGCCCGGCTCGACCTACAAGCCGTTCATGGCGCTGGCCGCGCTCGAGAGCGGCACCCGCACGCCGCAGGAGACGATCTCGGACCCCGGCTACTTCCAGCTCGGCAACCACCGCTTCCGCGATTCCAAGCCCGGCGGCCACGGCACCGTCGACCTGCGCAAGTCGATCGTCGTCTCCAGCGACACCTACTACTACAAGGTGGCCTTCGACATGGGCGTGGACAGGATCCACGACTTCATGAAGCCGTGGGGCTTCGGCCAGCTCACCGGCATCGACCTCGAGCACGAAGCCACCGGCATCCTGCCGTCCTCGGCCTGGAAGCTCAAGCGCTACAAGCAGAAGTGGCTGCCCGGCGAGACGCCCTCGATCGGCATCGGCCAGGGCTACAACGCGTTCACCATCCTGCAGCTGGCGCACGCCACGGCCACGCTGGCCAACGACGGCATCGTCATGAAGCCGCACCTGGTGCAGACGATCGAGGATCCGCTCAGCCACGCGCGCCGGCGCACGGTGCCCACCGAGAGCTACCGCATCCCGCTGCGGCGCGACCACCTCGACCTGGTCAGGCACGCCATGGCCGACGTCAATCGCTTCGGCACCAGCCGCGTGGCGTTCGCCAACACCGAGTACGTGGCCGCCGGCAAGACCGGTACCGCACAGGTGATCGGCATCAAGCAGGGCGAGCGCTACGACGCCAGGCGCGTCTCCGAGCGCCATCGCGACCACTCGCTGTTCATGGCGTTCGCGCCCCTGGACGAGCCGAAGATCGCCGTCGCGGTGATCGTCGAGAACGGCGGCTTCGGGGCCCAGGCGGCCGCCCCGATCGCGCGCAAGCTGTTCGACTTCTACCTGCTCGGCAAGCTGCCGAAGGACGTCAGGGAAGACCTGCTGCCCAGGCTGCTCGACGAGGCCGAGCTGCGCGACATCCCCGAGGACATCGTGGAGCCCGACCCGGCCGCCGCCACGGAGCCTGCCAGACCGTGA
PROTEIN sequence
Length: 651
MVEVRDTGKDLRQLRLRLAVAMVFVISCFGVLVARFVYLQVYRYADFHAQAEENRIALVPAPPSRGLIFDRNGVLLAENVSAYTLELLPKRVAGLEPTIEALSRIVEITPRDRRRFRRLLEDSRSADSVPLKVRLSDEEVARLAVQRFRFPGVEIRARLFRNYPLGETAAHVLGHIGRISPEDKRRLEEEERLSNYAGSTHIGKIGIELSYETALHGRAGADEVEVSAGGRVVRTLSRTPPVPGSNLVLSIDVRLQKLAEELFGERRGALVAIEPGTGDVLAFVSKPSFDPNLFIDGIDPQAWQALNEDPDKPLLNRPLRGTYPPGSTYKPFMALAALESGTRTPQETISDPGYFQLGNHRFRDSKPGGHGTVDLRKSIVVSSDTYYYKVAFDMGVDRIHDFMKPWGFGQLTGIDLEHEATGILPSSAWKLKRYKQKWLPGETPSIGIGQGYNAFTILQLAHATATLANDGIVMKPHLVQTIEDPLSHARRRTVPTESYRIPLRRDHLDLVRHAMADVNRFGTSRVAFANTEYVAAGKTGTAQVIGIKQGERYDARRVSERHRDHSLFMAFAPLDEPKIAVAVIVENGGFGAQAAAPIARKLFDFYLLGKLPKDVREDLLPRLLDEAELRDIPEDIVEPDPAAATEPARP*