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SCNpilot_expt_1000_bf_scaffold_93_curated_101

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 112290..113162

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 284.0
  • Bit_score: 421
  • Evalue 1.20e-114
dapF; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 286.0
  • Bit_score: 410
  • Evalue 6.40e-112
Diaminopimelate epimerase n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HXT4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 284.0
  • Bit_score: 421
  • Evalue 8.80e-115

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Taxonomy

Herbaspirillum sp. YR522 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGAGACTGCGCTTCACCAAGATGCACGGCGCCGGCAACGACTTCGTGGTCGTCGACGGCGTGCGCCAGACGGTGCAGCTGGAGCCGGCGCAGTGGCGCCGGCTCGCCGATCGCCACCTCGGCATCGGTGCCGACCAGATCCTGCTGGTGGAGCCGGCGCGTGGCGCCGGCGTCGATTTCCGCTATCGCATCTTCAATGCCGACGGCGGCGAGGTCGAGCAGTGCGGCAACGGCGCGCGCTGCTTCGTGCGCTTCGTGCACGACCAGGGCCTCAGCGAGCGGCGCGCCCTGCGCGTCGAGACGATGTCCGGCATCATCGAGCCCGCCCTCGAGGACGACGGCCGGGTGAGCGTCGACATGGGTCCGCCGGCCTTCGATCCGGCCGCGATCCCCTTCGATGCCAGCGGGCTGGCCGCGCGCACGCTCGGCGACGACACCCTGTGGCCGCTCGAGATCGCCGGCGCGCTGCGCTGGATCTCGGTGGTATCGATGGGTAACCCGCACGCGGTGCAGGTGGTCGACGACGTCGACGCCGCCCCGGTGGCCACGGAAGGCCCGCTCATCGAGCGCTGCGCGCGCTTCCCGCGCCGCGTCAACGCCGGCTATCTGCAGGTGCTCGAGCGCTCGCAGGCGCGCCTGCGCGTGTGGGAGCGCGGCGCCGGCGAGACGCTGGCCTGCGGCACCGGCGCGTGCGCGGCCGTGGTCACCGGCATCCGCCGCGGGCTGCTCGACGCGAGCGTCGACGTGCACACCCGCGGCGGACGCCTGAGCATCCGCTGGGACGGCGGCAACGTCCGCATGACCGGCCCGGCCGAAACGGTCTTCGACGGAGAGATCGACCTCCCCGTCGCCCCCCTCACGGATCCTGAATGA
PROTEIN sequence
Length: 291
MRLRFTKMHGAGNDFVVVDGVRQTVQLEPAQWRRLADRHLGIGADQILLVEPARGAGVDFRYRIFNADGGEVEQCGNGARCFVRFVHDQGLSERRALRVETMSGIIEPALEDDGRVSVDMGPPAFDPAAIPFDASGLAARTLGDDTLWPLEIAGALRWISVVSMGNPHAVQVVDDVDAAPVATEGPLIERCARFPRRVNAGYLQVLERSQARLRVWERGAGETLACGTGACAAVVTGIRRGLLDASVDVHTRGGRLSIRWDGGNVRMTGPAETVFDGEIDLPVAPLTDPE*