ggKbase home page

SCNpilot_expt_1000_bf_scaffold_93_curated_110

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 122350..123330

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XIA2_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 321.0
  • Bit_score: 328
  • Evalue 6.70e-87
transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 321.0
  • Bit_score: 328
  • Evalue 2.10e-87
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AGU52261.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 321.0
  • Bit_score: 328
  • Evalue 9.30e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGGCAACACAGCGGCCGAACGAATTCAGTACCGTGCTTCTGTCGTTGTACCGTGCCGCTTCCGAGCAATCGCTGATGGCATTCCAGGACGAGGCCCTGAAGATCATCAAGTCGGTGCTGCCGTTCGACTCGTCGATGTGGGGTACGGCGACGCACACGGACGTCGGCATCGACATCCACAGCATTCACCTGCACAACTCATCGCAGGACATGCTCGACTTCTACGAAGAGGTCAAGCATCAGGACGCCGCGGCGGCGGCCTGCACGCGTTCCCCGCAAGCCACGCTCGCGTTCCATTCCCCCACGATGTTCGCGGGCAGGGCGCACAGCGGCATGCGCGCGCTGTGCGAGCGGTTCGGACACGCGAACATGCTGATCAGCTCCGATCTGCGCCCGGAGACGCGGTTCGTTCAGTGGATTTCGCTGTACCGGGCCGATCCCGATGCGCACTGCGGCGAGCGGGAGCGGGCGTTCCTCGAGCTGCTCGCGCCGCACGTGATGCAGTCGCTCGCGATCAACCGGCTCACCCATCTCGACCGGCTGTCGTCGAGCCGGCATGGCGCGGACAAGGGTTTGGCGATCGCCGACGCGCGCGGCGTGCTGTATCACGCCGGCGAGGACTTCGAGTATTTGTTGCGCAGCGAGTGGAGCGGCTGGGACGGCCGCGCCTTACCGGCGCCGCTGCGCGACCATTTCTCCCGCGGGCTCACGCCGTTTCGCGGCAAGGCCCTGGTCGCGCGATGCTCGCTCGACAAGGGGCTGCTGTTCCTGCGGGTACGCGCGCGCAGACCCGTGGACAATCTCACGGAACGCGAGTACGCGATCGCGAAGCTGCTCGCGCAGGGCGCTACGCACAAACACGTCGCGCGCGCGCTGAATCGCTCGCCGGCAACGGTGCGCAACCAGATCCAGACGATCTACGAGAAGCTGGGCATCAACAACGTGGTCGCACTCGTGGGCGAGTTGAGCTTCGACCGCTGA
PROTEIN sequence
Length: 327
MATQRPNEFSTVLLSLYRAASEQSLMAFQDEALKIIKSVLPFDSSMWGTATHTDVGIDIHSIHLHNSSQDMLDFYEEVKHQDAAAAACTRSPQATLAFHSPTMFAGRAHSGMRALCERFGHANMLISSDLRPETRFVQWISLYRADPDAHCGERERAFLELLAPHVMQSLAINRLTHLDRLSSSRHGADKGLAIADARGVLYHAGEDFEYLLRSEWSGWDGRALPAPLRDHFSRGLTPFRGKALVARCSLDKGLLFLRVRARRPVDNLTEREYAIAKLLAQGATHKHVARALNRSPATVRNQIQTIYEKLGINNVVALVGELSFDR*