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SCNpilot_expt_1000_bf_scaffold_93_curated_112

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(124299..124646)

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 4,5-dioxygenase (4,5-PCD), alpha chain {ECO:0000313|EMBL:CCE07937.1}; EC=1.13.11.8 {ECO:0000313|EMBL:CCE07937.1};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 113.0
  • Bit_score: 200
  • Evalue 1.80e-48
Protocatechuate 4,5-dioxygenase (4,5-PCD), alpha chain n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TN99_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 84.1
  • Coverage: 113.0
  • Bit_score: 200
  • Evalue 1.30e-48
protocatechuate 4,5-dioxygenase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 82.3
  • Coverage: 113.0
  • Bit_score: 196
  • Evalue 3.40e-48

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Taxonomy

Bradyrhizobium sp. STM 3843 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGAAGGCAGGCAAGCGACAGATTCCCGGCACGACCATCTTCGACGGCGCGCAAGCGCGCAAGGGCTACGCGCTCAACAAGATGTGCTTCTCGTTCAACGACGCCGCCAATCGCGAGGCGTTCCTGCGCGACGAGGACGCCTACTGCGCGAAGTACGGCCTCAACCCGCAGCAGCGCGAGGCGATCCGCGCGCGCAACGTGCTGCAGCTCATCGAGGCCGGCGGCAACGCCTATTACCTGGCCAAGTTCGCCGGCATCTTCGGGCTCGACATGCAGGACATCGGCGCGCAGCAGACCGGCATGACCAAGGAACAATTCAAGGCCATGCTCGTGGCCGCCAGGGGGTAG
PROTEIN sequence
Length: 116
MKAGKRQIPGTTIFDGAQARKGYALNKMCFSFNDAANREAFLRDEDAYCAKYGLNPQQREAIRARNVLQLIEAGGNAYYLAKFAGIFGLDMQDIGAQQTGMTKEQFKAMLVAARG*