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SCNpilot_expt_1000_bf_scaffold_229_curated_2

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1731..4826

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XCT4_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 999.99
  • Bit_score: 789
  • Evalue 5.70e-225
transcriptional regulator, LuxR family similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 999.99
  • Bit_score: 789
  • Evalue 1.80e-225
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AGU50742.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.7
  • Coverage: 999.99
  • Bit_score: 789
  • Evalue 8.00e-225

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3096
ATGCCGGCCATGGTCGCCTTCTGTCCGCGTTGCCATCGCAGCAATCGCCCCGCCGCCGCCTTCTGCGACGGCTGCGGCGCGCCGCTCGATGCCGGCGCGCGCGCCTCGCCGCGGCAGGCTGCGCCGCATGCCGAACCCTTCATCGGACGCGAGCGCGAACTGGCGAGCTTCGATGCCGCGCTCGCCGAGGCCCTCGACATGGAGGGCCGCCTGCTCGTGCTGGCCGGCGATCCCGGCATCGGCAAGACGCGCACCGCGCAGGCACTGGCGCAGCGCGCGCAGGCGCAGGGCCTGCGCGTGCTGTGGGGCCGCTGCCCCGAAGAGCCCGGCTCGCCTCCTTACTGGCCGTGGCTGCAGGTGCTGCGCGCCTGGCTCGGCACGCTGGAAGACGATGCGCAGCTGCGCGCCGTGCTCGGCCACGCCGCCAGCCACCTCGCCGAGATCGTGCCCGAGATCGCCGCCCGCTGCCCCGGCCTGCCCGCCGTCGCGGCCACCGCCGACGCCGCGCAGGCACGCTTCCGCCTGTTCGACGCGATCGCCGGCGTGCTCGCGCGCATTGCTGCCGAGCGTGGCCTGGTGCTGATCCTGGACGACCTGCACTGGGCCGACACGCCGTCGCTGCGCCTGCTCGAGTTCCTCGCACCCGAGATCGGCACCCGCCGCATGCTGGTGCTGGGCACCTATCGCGACATCGCGCTGGCGCGCCACCACCCCTTGTCGGACACCCTCGGCACGCTGGCGCGCCATCCCCGCTTCACGCGCCTGCGCCTCCTCGGCCTGTCGCTCGAGGAAACCGGCCGCTTCATCGCCGAGGCGAGCGGCGCGGCCCCTTCGCCCGAGCTGCTCGCCGCGGTGCATGCCCAGACCGAGGGCAACCCCCTGTTCGTGGCCGAGACCACGCGCTTCCTGGTGCAGGAAGGGGTCCTTGGCGGCGACGCGGCGCCGTCCTCGCCCGCGCGCGGCGCACGCCTGCCGCGCCGGATCCCGGAAGGGGTGCGCGAGGCCATCGGCAGCCGGCTCAACCGGCTGTCGCCGGCCTGCAACCGGGTGCTGGCATGCGCGGCGGTGATCGGGCGCAGCTTCGACACCCGGGTGCTGGCTCGCCTGCTGGACGGGACGCCGCAGGAGGAGTGGTCGGCGGCGCTCGACGAAGCGCTCGCCGCGTCGATCATCGAGGCGCTCGCCGAACCGGGCGCCTGGCAGTTCAGCCACGTGCTGATCCGCGAGACGCTCTACGACGAAGTGCCGGCGACGCGCCGCGCGCGCCTGCACCTGGCGATCGGCGCGATCCTCGAGACCCTGCACGGCGGCGACCCGATGGCCGAGGTGGCGACGCTGGCGCACCACTACTGCGCCGCCCTGCCGGCCGGCGATCCGGCCCGGGCGATCGAATACGCGCGGCGCGCGGCGCGGCGCGCCGACGCCCTGTTCGCATGGGAGGAGGCGGCGCGCTACTACCGCCTGGCCCTGCAGGCGCTCGACGATGCCGATCCCGGCGCCGCGCGCGAGCGGCTCGGCCTGCTGATCGCGCTGGGCAGCGCGCTGACCCGGGCCGGCGAGGACCTGGAGGCGGCCGAGATCCTGCAGCGCACCGCCGGCAGCGCCCGGACGCTCGGGCTGTCCGAGGAGCTGGCGCGCGCGGCCTGCGGCTTCGAGGAGGCGACCTGGCGCCCGGGGCTGCCGGGGCACGCCGCCGCACGCCTGCTGCACGATGCGCTGGCCGGGCTCGACGAAGGCGACAGCGTGCTGAAGGTGGAAGTGCTGAGCTCGCTCACGCGGGCCCTCATCTTCAGCGGCGACAGCGAGGCGGCCGCGCGCTTCGGCGCACAGGCCGAGGCGATGGCGCGGCGCATCGGCGATCCGCGGGCCCTGTCGACCGCGCTGCGCGCGGGGCTGTCGGCGCGCTGGCGGCCCGAGCAGTTCGAGCGGCGCATGGCGACCACGCTGGAGGCGATGCGCCTCGCCGAGCAGGTGGGCGATCGCGACCGCGCGCTCGAAGCCAGCAGCTGGCGCCTGTTCGACCTCATGGAGCTGGGCGACCTGCAGCAGCGCGCCGAGGAATTCCGCGCCTACGCGGAAGCCGCCAGCGCGACCCGCCAGCCCTTCTACCACTACATCTGCCTGTCCTCGCACGCCATGCTGGCCCTGTTCCACGGCCGCTTCGAGCAGGCCGAGCAGCACGCGCGCGAGGCGCTCGAATTCGGCCGGCGCATGCCCAGCCTCGATGCGGCGGGCGTCTTCGGCCTGCAGATGTTCAGCCTGCGCCGCGAGCAGGGGCGGCTGAAGGAGCTGGCTCCGCTGGTGGCGCATTTCGTGCAGGCCACCCCCGCGGCCGCCGCCTGGCGGCCGGGCCTGGCCATCGTGTATGCCGAGATCGGGATGACCGAGCAGGCGCGCGCGCAGTTCGAGCTGCTGGCCGCCGACGGCTTCGCGGCGGTGCCGCGCGATGCGCTCTGGGTCGCCTCGATGGCCTACCTGGCCGAGGTGTGCGCCCTGCTCGGCGACGCGCCGCGCGCCGGGCAGCTGTACGAGTTCCTGCTGCCCTGCGAAGGGCGCAACATCGTCGCCCCGCCCAACGTCGCCTGCTACGGAGCGGCGGCGCGCCAGCTCGGCATGCTGGCCGCGACGTGCCGGCGCTGGGCGCAGGCGCAGCAGCATTTCGAGGCGGCACTGCAGGCCAATACGCGCCAGGAAGGCTGGCCGTGGCTCGCGCATACGCAGCACCAGTACGCGGCGATGCTGCTCGCGCGCGCCCAGCCCGGCGACGGCGCACGCGCGGCGGGCCTGCTCGACGAGGCGATCGCCTCGAGCCGGACCCTCGGCATGCCGGCGCTCGGCGAGCGCGCCGCGGTGCTGCGCGCGCGCCTCGGCGAGCGCGAGCCCGGCGGCGAGCCGCGCCCGGCCGGCCTGAGCGTGCGCGAGATCGAGGTGCTGCGCCTGGTGGCCACCGGCAAGGGCAACCGCGAGATCGCGCGCCAGCTCTTCGTGAGCCCCAACACGGTGGCCAACCACGTGCGCAGCATCCTCACCAAGACGCGCACCGCCAACCGCACCGAGGCGGCGGCGTTCGCGCTGCGCCACCTGCCGCGCAGCTGA
PROTEIN sequence
Length: 1032
MPAMVAFCPRCHRSNRPAAAFCDGCGAPLDAGARASPRQAAPHAEPFIGRERELASFDAALAEALDMEGRLLVLAGDPGIGKTRTAQALAQRAQAQGLRVLWGRCPEEPGSPPYWPWLQVLRAWLGTLEDDAQLRAVLGHAASHLAEIVPEIAARCPGLPAVAATADAAQARFRLFDAIAGVLARIAAERGLVLILDDLHWADTPSLRLLEFLAPEIGTRRMLVLGTYRDIALARHHPLSDTLGTLARHPRFTRLRLLGLSLEETGRFIAEASGAAPSPELLAAVHAQTEGNPLFVAETTRFLVQEGVLGGDAAPSSPARGARLPRRIPEGVREAIGSRLNRLSPACNRVLACAAVIGRSFDTRVLARLLDGTPQEEWSAALDEALAASIIEALAEPGAWQFSHVLIRETLYDEVPATRRARLHLAIGAILETLHGGDPMAEVATLAHHYCAALPAGDPARAIEYARRAARRADALFAWEEAARYYRLALQALDDADPGAARERLGLLIALGSALTRAGEDLEAAEILQRTAGSARTLGLSEELARAACGFEEATWRPGLPGHAAARLLHDALAGLDEGDSVLKVEVLSSLTRALIFSGDSEAAARFGAQAEAMARRIGDPRALSTALRAGLSARWRPEQFERRMATTLEAMRLAEQVGDRDRALEASSWRLFDLMELGDLQQRAEEFRAYAEAASATRQPFYHYICLSSHAMLALFHGRFEQAEQHAREALEFGRRMPSLDAAGVFGLQMFSLRREQGRLKELAPLVAHFVQATPAAAAWRPGLAIVYAEIGMTEQARAQFELLAADGFAAVPRDALWVASMAYLAEVCALLGDAPRAGQLYEFLLPCEGRNIVAPPNVACYGAAARQLGMLAATCRRWAQAQQHFEAALQANTRQEGWPWLAHTQHQYAAMLLARAQPGDGARAAGLLDEAIASSRTLGMPALGERAAVLRARLGEREPGGEPRPAGLSVREIEVLRLVATGKGNREIARQLFVSPNTVANHVRSILTKTRTANRTEAAAFALRHLPRS*