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SCNpilot_expt_1000_bf_scaffold_743_curated_27

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 28620..29558

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003629541 similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 308.0
  • Bit_score: 233
  • Evalue 2.80e-58
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 41.2
  • Coverage: 308.0
  • Bit_score: 228
  • Evalue 2.80e-57
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU47469.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.2
  • Coverage: 308.0
  • Bit_score: 228
  • Evalue 1.30e-56

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 939
GTGAATTTATCGGTCCGCCAGCTGCGCGCCTTCGTCGAGGTGGCGCGCCTGGCCAGCTTCACGCGGGCGGCCGAGCGCGTGCACGTCACGCAGGCGGGGCTGAGCGCGATGATCCGCGAGCTCGAGGCGCAGCTCGGCGCGCGCCTGTTCGAGCGCACCACCCGCTCGGTGACGCCGACCTCGGCCGGGCGCGCGCTGCTGCCCAGCGCCGAGCGCGTGCTCGCCGAGCTGGAGCGCGCGCGTGAGCGCATCGCCCGCATCGACAGCGCCGCGTCGGCCCGCGTGGCGGTCACCGCGCTGATCGCCGCCCACGTGTTGCCGCCGGTGATCGCGCGGCTGCACGCCGCCCACCCCGGGGTGGCGCTCGACATCGTGGACGCCGGGCCCCAGGAGATGCAGCGCATGGTCGAGCGCGACGAGGTCGATCTCGCGCTGGGCGCCTTCCTGCGGCCGGCCGCCGGCATCGAGCGGGTGGCGGTGTTCCGTTTCGGCCTGGCGCTCGCCACGCTGCCTTCGCATCCGGGGCTGGCGCAGCGCGCCGGCGGGTCGCCGGGGCGCGGCGGCGGCACGCTCCCCTGGCAGCGGCTGCGCGGCGAGCCGCTGATCGGGCTGGCTGCCGACAACCTGCTGCAGCAGCGCATCGACGTCGTGCTCGCGCGCCACGGCGTCGAGCCCTCGATCGCGGCGCGCTTCAACACCCTCGAGACGGTGCTCGCCATGGCGGCGGCCGGCATCGGCTCGGCGATCGTGCCCACCTTCACCCGCCCGGCCTGCCGGCGCTACGGCCTGCGCATGATCGGGCTGCGCGCGCCCGAAGCCGGGTTCGACTTCTACCGGATCAGCCGCAAGGGCGCCGCGTTCGGGCCGGCCGTGGCGCTGCTGATCGGGCTGCTGCGCGAGGAGGTCGACGCCATCGCAGCCGGGGCGCGCGAGCCGTGA
PROTEIN sequence
Length: 313
VNLSVRQLRAFVEVARLASFTRAAERVHVTQAGLSAMIRELEAQLGARLFERTTRSVTPTSAGRALLPSAERVLAELERARERIARIDSAASARVAVTALIAAHVLPPVIARLHAAHPGVALDIVDAGPQEMQRMVERDEVDLALGAFLRPAAGIERVAVFRFGLALATLPSHPGLAQRAGGSPGRGGGTLPWQRLRGEPLIGLAADNLLQQRIDVVLARHGVEPSIAARFNTLETVLAMAAAGIGSAIVPTFTRPACRRYGLRMIGLRAPEAGFDFYRISRKGAAFGPAVALLIGLLREEVDAIAAGAREP*