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SCNpilot_expt_1000_bf_scaffold_637_curated_4

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1624..2925)

Top 3 Functional Annotations

Value Algorithm Source
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 432.0
  • Bit_score: 656
  • Evalue 2.60e-185
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 434.0
  • Bit_score: 638
  • Evalue 1.60e-180
seryl-tRNA synthetase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003682F13 similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 432.0
  • Bit_score: 644
  • Evalue 9.50e-182

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Taxonomy

Herbaspirillum sp. TSA66 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1302
ATGCTCGACATCGCCCAGCTCCGCAAGGATCCCGAAGCCGTCGCCGCGCGGCTGGCCTCCCGCGGCTATACGCTCGACCTCGGCGCGTTCCGCACGCTCGAGTCCGCGCGCAAGGCGCTGCAGACGCGCGCCGAGGCGCTGCAGGCGCGCCGCAACGCGCTGTCGAAGTCGATCGGCCAGCTCAAGTCGCGCGGCGAAGACACCTCGGCGGTGATGGCCGAGGTGGCCGGCCTGGGCGACGAGCTGAAGGCCGCCGCTGAAGAGAACGAAACCGTGCAGGCGAAGCTGCACGACTGGCTGCTGCAGGTGCCCAACCTGCCGCACGAATCGGTGCCGGCGGGCCACGACGAGCGGCACAACCGCGAAGTGCGCCGCTGGAGCCCGCAGGGCCGCGACCCCGAGCCGCTGGGGTTCGCGCCGCGCGATCACGTCGACGTCGGCGCCCCGCTCGGCCTCGACTTCGAGACCGCGGCGAAGCTTTCCGGCGCACGCTTCGTGGTGATGAAGGGCGCGATGGCGCGGCTGCACCGCGCCATCGCGCAGTTCATGCTCGACGTGCAGACCGGCGAGCACGGCTACACCGAGTGCTACACGCCATACATCGTCAACCGCGACAGCCTGCGCGGCACCGGGCAACTGCCCAAGTTCGAGCAGGACCTCTTCGCCGCGAAGAAGGGCGGCCAGGAAGGCGAGGGCGAGTCGCTGTACCTCATCCCCACCTCCGAGGTGCCGCTCACCAATTTCGTGCGCGACCAGATCGTCGCGGCCTCCGGCCTGCCGATCCGCCTCACCGCGCACACGCCGTGCTTCCGCTCCGAGGCCGGCGCCTACGGCCGCGATACGCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTGCAGATCGTGCATCCCGATCACTCCTACGAGGCCCTCGAGCAGATGGTGGGCCACGCCGAGGCGATCCTGCGCCGGCTCGGTCTGGCCTACCGGGTGGTGCTGCTGTGCACCGGCGACATGGGCTTCGGCGCCGCCAAGACCTACGATCTCGAGGTGTGGCTGCCGGCGCAGGAGGCCTATCGCGAGATCTCCTCGGTGTCGAACTGCGAGGCCTTCCAGGCCCGGCGCATGCAGGCGCGCTTTCGCGGCGCCGACGGCAGGATCGGCCTGCTCCACACCCTGAACGGTTCCGGGCTCGCCGTCGGGCGCACCCTGGTCGCCGTGCTCGAGAACCATCAGCAGCCCGACGGCTCGGTACGCGTGCCCGACGCGCTGGTGCCCTACATGGGCGGGCTGCGGCGCATCACGGCCTGA
PROTEIN sequence
Length: 434
MLDIAQLRKDPEAVAARLASRGYTLDLGAFRTLESARKALQTRAEALQARRNALSKSIGQLKSRGEDTSAVMAEVAGLGDELKAAAEENETVQAKLHDWLLQVPNLPHESVPAGHDERHNREVRRWSPQGRDPEPLGFAPRDHVDVGAPLGLDFETAAKLSGARFVVMKGAMARLHRAIAQFMLDVQTGEHGYTECYTPYIVNRDSLRGTGQLPKFEQDLFAAKKGGQEGEGESLYLIPTSEVPLTNFVRDQIVAASGLPIRLTAHTPCFRSEAGAYGRDTRGMIRQHQFDKVEMVQIVHPDHSYEALEQMVGHAEAILRRLGLAYRVVLLCTGDMGFGAAKTYDLEVWLPAQEAYREISSVSNCEAFQARRMQARFRGADGRIGLLHTLNGSGLAVGRTLVAVLENHQQPDGSVRVPDALVPYMGGLRRITA*