name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_637_curated_1
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3..419)
|
Replication initiation factor n=1 Tax=Ralstonia pickettii (strain 12J) RepID=B2UBK9_RALPJ
replication initiation factor
Replication initiation factor {ECO:0000313|EMBL:ACD26530.1}; TaxID=402626 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii (strain 12J).;"
|
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SCNpilot_expt_1000_bf_scaffold_637_curated_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(416..1102)
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYW5_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH48731.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_3
unknown
|
Not on your lists |
1203..1490
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_637_curated_4
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1624..2925)
|
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
seryl-tRNA synthetase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003682F13
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_5
Oligella urethralis, Oligella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3057..4634)
|
ATPase AAA n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003664C56
Recombination factor protein RarA {ECO:0000313|EMBL:KGF31001.1}; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella urethralis DNF00040.;"
FIG065221: Holliday junction DNA helicase
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4612..5874)
|
MFS transporter n=1 Tax=Curvibacter lanceolatus RepID=UPI00036ED0A0
major facilitator superfamily protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_7
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6017..7150)
|
Low-specificity D-threonine aldolase n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6STY6_JANMA
low-specificity D-threonine aldolase
Low-specificity D-threonine aldolase {ECO:0000313|EMBL:ABR89770.1}; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
|
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SCNpilot_expt_1000_bf_scaffold_637_curated_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7134..7772)
|
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000372E588
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
lolA; outer-membrane lipoprotein carrier protein; K03634 outer membrane lipoprotein carrier protein
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_9
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7772..10147)
|
cell division protein FtsK n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E78DAF
Cell division protein FtsK {ECO:0000313|EMBL:KIF82406.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
ftsK; DNA translocase; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_10
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10167..10841)
|
Cyclic nucleotide-binding domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RW32_9BURK
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EFV95515.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
Crp/Fnr family transcriptional regulator; K10914 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_11
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11000..11959
|
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=640512 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
Thioredoxin reductase n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1TBH3_BURSG
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_12
Ralstonia sp. PBA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11977..12648
|
Smr protein/MutS2 n=1 Tax=Ralstonia sp. PBA RepID=I9W300_9RALS
hypothetical protein
Smr protein/MutS2 {ECO:0000313|EMBL:EIZ02807.1}; TaxID=795666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. PBA.;"
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria
|
Not on your lists |
comp(12652..13260)
|
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
4-diphosphocytidyl-2C-methyl-D-erythritol synthase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SLF6_RHOMR
4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000313|EMBL:AEN74673.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_14
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13353..14009
|
Uncharacterized protein n=1 Tax=Thauera sp. 63 RepID=N6X0F6_9RHOO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_15 |
Not on your lists |
comp(14042..14386)
|
Nitrogen regulatory protein P-II 1 n=1 Tax=mine drainage metagenome RepID=E6PT02_9ZZZZ
Nitrogen regulatory protein P-II 1 {ECO:0000313|EMBL:CBH98059.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
nitrogen regulatory protein P-II; K04751 nitrogen regulatory protein P-II 1
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_16
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14494..16107)
|
NAD+ synthase (Glutamine-hydrolysing) {ECO:0000313|EMBL:ABR88483.1}; EC=6.3.5.1 {ECO:0000313|EMBL:ABR88483.1};; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
NAD synthetase n=1 Tax=Herbaspirillum lusitanum RepID=UPI000305C40E
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_17
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16122..17351
|
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R326_CUPTR
hypothetical protein; K09919 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ68707.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_18
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17246..18706)
|
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XEG5_METSD
NodT family RND efflux system outer membrane lipoprotein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_19
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18703..21828)
|
Hydrophobe/amphiphile efflux-1 (HAE1) family transporter n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WR45_9BURK
hydrophobe/amphiphile efflux-1 (HAE1) family transporter; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_20
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21845..23086)
|
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003659E5D
secretion protein HlyD; K03585 membrane fusion protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23162..23785
|
Transcriptional regulator, TetR family n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB71_NITMU
TetR family transcriptional regulator; K03577 TetR/AcrR family transcriptional regulator, acrAB operon repressor
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABB74000.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_22
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23839..24387)
|
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
Inorganic pyrophosphatase n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SWN9_POLSQ
|
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SCNpilot_expt_1000_bf_scaffold_637_curated_23
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24539..25705)
|
Porphyrin biosynthesis protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VWN5_9BURK
Heme biosynthesis protein HemY {ECO:0000313|EMBL:KFI06479.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein; K02498 HemY protein
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25702..26898)
|
bifunctional uroporphyrin-III c-methyltransferase and uroporphyrinogen-III synthase transmembrane protein (EC:2.1.1.107 4.2.1.75); K13543 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DP14_9BURK
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_25
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26898..27677)
|
Probable bifunctional: uroporphyrin-III c-methyltransferase and uroporphyrinogen-III synthase transmembrane protein (EC:2.1.1.107 4.2.1.75)
Bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EON14129.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EON14129.1};; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
Bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7X3S2_9BURK
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_26
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27659..28621)
|
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00037F967F
|
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SCNpilot_expt_1000_bf_scaffold_637_curated_27
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28690..29490)
|
Response regulator receiver domain protein n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RW44_9BURK
Response regulator receiver domain protein {ECO:0000313|EMBL:EFV95527.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
algR; alginate biosynthesis regulatory protein AlgR; K08083 two-component system, LytT family, response regulator AlgR
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_28
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29459..30616)
|
Histidine kinase n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RW45_9BURK
Histidine kinase {ECO:0000313|EMBL:EFV95528.1}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
two-component system sensor ATPase
|
|
SCNpilot_expt_1000_bf_scaffold_637_curated_29
Lautropia mirabilis, Lautropia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30720..32123
|
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;"
Argininosuccinate lyase n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RW46_9BURK
|
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SCNpilot_expt_1000_bf_scaffold_637_curated_30
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32160..34148)
|
TRAP transporter, 4TM/12TM fusion protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8PSW5_9BRAD
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EKS42625.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
hypothetical protein
|