ggKbase home page

SCNpilot_expt_1000_bf_scaffold_146_curated_11

Organism: scnpilot_dereplicated_Burkholderiales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(13816..14775)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus B4 RepID=T1X9P3_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 42.2
  • Coverage: 308.0
  • Bit_score: 239
  • Evalue 5.20e-60
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 308.0
  • Bit_score: 239
  • Evalue 1.60e-60
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGU49191.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.2
  • Coverage: 308.0
  • Bit_score: 239
  • Evalue 7.30e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 960
ATGGCGAGACTCGAGTGGTACATCAGGGCCAACCTCAAGCCGCGGCACATGCAGTTGCTCGTGGCGCTCGACGACTTCCGTCACGTCGGCAAGGCCGCCGCCTTCCTCAACATCACCCAGCCTGCGGTTTCGAAGACCCTTGCCGAGCTCGAGCGCGGGCTCGAGGTCACGCTATTCGAGCGCGGCTCGAGAGGCCTGGTGCCGACCGCCTACGGCCGGTGCCTGATCCGGGTATCGCGCTCAGTGCTGCGCGATCTGGACGCCGCCCGCGACGAGTTGCGCCAGATGCGCTCGGGATCGACCGGGCGTGTGCGCATCGGCACGCTGCCGGTCGCGGCGCCGGCGCTGGCGCCACGGGCGGCGATACGCCTGCAGGCCAGGCGGCCGGGCACGGCCATCAGTTTCCAGGAGGCCACCGCGGACCGATTGCTGCCGCTGCTTCGCGAGGGCCTCCTCGACGTGGTCGTCGGCACCCTTCCGCCTGCCTCGATGACACTCGGCCTCGAGACGGCCGCGCTGCACCCGGGAGACGGGGTGGCGGTGGTCTGCGGGATGGGCCACCCGCTCGCCACGCGGCGACGGATCGCGGCCGCCGACCTGCTGCCCTACCCGGTCGTGATGCCGCCGCTGGGGTCGATCTTCCGCGCGACCGTCGAGGGAGCGCTCGCCGCGCTCGAGCTCACGACGGCCTCCGCAATGGTCGAATCCGGATCGATGACCGCCAGCAACACCTATCTGCGCGAGACGAACGCGATCAGCTTCTACTCGCGGCATCTGGCGCTGCACTATTCACGCGTGGGCATGCTGCGCGTGTTGCCGATCGCGGTCCCCGGGGCCGCGCTTCCGATCGGCGCCGTGTGGTCCCGCCATAACGAGGCGAACCCGGCGGTGCCCGAGCTGATCGATTGCCTGCGCGAGGTCGCTCACGAGGTGCTCGAGGCGGAACCGGCGTACGGCTGA
PROTEIN sequence
Length: 320
MARLEWYIRANLKPRHMQLLVALDDFRHVGKAAAFLNITQPAVSKTLAELERGLEVTLFERGSRGLVPTAYGRCLIRVSRSVLRDLDAARDELRQMRSGSTGRVRIGTLPVAAPALAPRAAIRLQARRPGTAISFQEATADRLLPLLREGLLDVVVGTLPPASMTLGLETAALHPGDGVAVVCGMGHPLATRRRIAAADLLPYPVVMPPLGSIFRATVEGALAALELTTASAMVESGSMTASNTYLRETNAISFYSRHLALHYSRVGMLRVLPIAVPGAALPIGAVWSRHNEANPAVPELIDCLREVAHEVLEAEPAYG*